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L1_007_000G1_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_448_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(262..1686)
DNA (1425bp) protein (475aa)
Sensor histidine kinase CssS {ECO:0000313|EMBL:KJJ69120.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ69120.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKJ2_9CLOT
Signal transduction histidine kinase
L1_007_000G1_scaffold_448_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1698..2405)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97736.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_448_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2572..3744
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37354.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glycosyl hydrolase
L1_007_000G1_scaffold_448_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3817..5955)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40785.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alpha amylase
L1_007_000G1_scaffold_448_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6466..8292)
DNA (1827bp) protein (609aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKD0_9CLOT
L1_007_000G1_scaffold_448_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..10395)
DNA (2040bp) protein (680aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTE2_9CLOT
L1_007_000G1_scaffold_448_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10516..11931)
DNA (1416bp) protein (472aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RIZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18903.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L1_007_000G1_scaffold_448_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12075..12338)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40780.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
septum formation initiator
L1_007_000G1_scaffold_448_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12427..12771)
DNA (345bp) protein (115aa)
Putative spore cortex biosynthesis protein YabQ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFL4_9FIRM
Putative spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:EEQ59137.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Spore cortex biosynthesis protein, YabQ-like protein
L1_007_000G1_scaffold_448_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12785..13072)
DNA (288bp) protein (96aa)
Sporulation protein YabP n=9 Tax=Clostridium RepID=G5HXU4_9CLOT
Sporulation protein YabP {ECO:0000313|EMBL:ENZ66754.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sporulation protein YabP
L1_007_000G1_scaffold_448_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13194..13433)
DNA (240bp) protein (80aa)
S4 domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFL6_9FIRM
S4 domain protein {ECO:0000313|EMBL:EEQ59139.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
RNA-binding S4 domain-containing protein
L1_007_000G1_scaffold_448_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13437..13712)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF87_9CLOT
DNA-binding protein HU {ECO:0000313|EMBL:CCY40765.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Bacterial nucleoid DNA-binding protein
L1_007_000G1_scaffold_448_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13911..14525)
DNA (615bp) protein (205aa)
V-type ATP synthase subunit D n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVK2_9CLOT
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
V-type ATPase subunit D
L1_007_000G1_scaffold_448_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14537..15913)
DNA (1377bp) protein (459aa)
V-type ATP synthase beta chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF83_9CLOT
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
H+transporting two-sector ATPase subunit alpha/beta
L1_007_000G1_scaffold_448_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15925..17691)
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sodium-transporting two-sector ATPase (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF60_9CLOT
L1_007_000G1_scaffold_448_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17692..18273)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFM2_9FIRM
V-type H+-transporting ATPase subunit E {ECO:0000313|EMBL:ENZ16702.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L1_007_000G1_scaffold_448_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18328..18636)
DNA (309bp) protein (103aa)
ATP synthase subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVJ9_9CLOT
ATP synthase subunit {ECO:0000313|EMBL:CCY40756.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Vacuolar H+transporting two-sector ATPase F subunit
L1_007_000G1_scaffold_448_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18636..19076)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40755.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
H+transporting two-sector ATPase subunit C
L1_007_000G1_scaffold_448_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19106..21052)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKA1_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
V-type ATPase 116 kDa subunit
L1_007_000G1_scaffold_448_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21068..22090)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40753.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
H+transporting two-sector ATPase C (AC39) subunit
L1_007_000G1_scaffold_448_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22095..22406)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40752.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_448_22
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22727..24499)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZIV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13933.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
methyl-accepting chemotaxis sensory transducer
L1_007_000G1_scaffold_448_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25841)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VZS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12188.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SH3 type 3 domain-containing protein
L1_007_000G1_scaffold_448_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25957..26781)
DNA (825bp) protein (275aa)
Cof-like hydrolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF13_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEQ58666.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cof family hydrolase
L1_007_000G1_scaffold_448_25
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26826..28142)
DNA (1317bp) protein (439aa)
Sugar-binding periplasmic protein n=1 Tax=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) RepID=Q97J30_CLOAB
sugar-binding periplasmic protein
Sugar-binding periplasmic protein {ECO:0000313|EMBL:AAK79424.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L1_007_000G1_scaffold_448_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28250..28924)
DNA (675bp) protein (225aa)
Two-component system response regulator n=2 Tax=Clostridium bolteae RepID=N9ZWL2_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ51072.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
two-component system response regulator
L1_007_000G1_scaffold_448_27
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28924..30234)
DNA (1311bp) protein (437aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U324_ETHHY
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADU26391.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_007_000G1_scaffold_448_28
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30248..31213)
DNA (966bp) protein (322aa)
Ribose ABC transporter (Ribose-binding periplasmic component) n=3 Tax=Clostridium acetobutylicum RepID=F0K3U3_CLOAE
rbsB; ribose ABC transporter periplasmic ribose-binding protein
Ribose ABC transporter (Ribose-binding periplasmic component) {ECO:0000313|EMBL:AAK79421.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L1_007_000G1_scaffold_448_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31345..32157)
DNA (813bp) protein (271aa)
UPI0003D5A10D related cluster n=1 Tax=unknown RepID=UPI0003D5A10D
PTS system, fructose {ECO:0000313|EMBL:ETI88755.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
PTS system fructose(mannose)-specific transporter subunit IID
L1_007_000G1_scaffold_448_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32159..33001)
DNA (843bp) protein (281aa)
PTS system, fructose-and mannose-inducible IIC component {ECO:0000313|EMBL:KJZ88691.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ88691.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system, fructose n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCS8_CLOBU
PTS system fructose(mannose)-specific transporter subunit IIC
Displaying items 1-30 of 73 in total

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