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L1_007_000G1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_451_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1748)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=2 Tax=root RepID=R5E3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82746.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000G1_scaffold_451_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1903..2916)
DNA (1014bp) protein (338aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:CBL15367.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBL15367.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
UDP-galactose 4-epimerase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6X2_9FIRM
L1_007_000G1_scaffold_451_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2938..3456)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRD1_9FIRM
L1_007_000G1_scaffold_451_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3543..4577)
DNA (1035bp) protein (345aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6X0_9FIRM
L1_007_000G1_scaffold_451_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4631..5065)
DNA (435bp) protein (145aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3I9_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCX82741.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_451_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5055..5516)
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL15363.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL15363.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Protein-tyrosine-phosphatase n=2 Tax=Ruminococcus RepID=D4L6W8_9FIRM
L1_007_000G1_scaffold_451_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5476..8040)
DNA (2565bp) protein (855aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460, ECO:0000313|EMBL:CBL15362.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6W7_9FIRM
L1_007_000G1_scaffold_451_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8037..9215)
DNA (1179bp) protein (393aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Alanine racemase n=2 Tax=Ruminococcus RepID=D4L6W6_9FIRM
L1_007_000G1_scaffold_451_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9487..11052
DNA (1566bp) protein (522aa)
Sodium/proline symporter n=2 Tax=root RepID=R5E1Q2_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:CCX82737.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sodium/proline symporter
L1_007_000G1_scaffold_451_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11230..11808
DNA (579bp) protein (193aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6W4_9FIRM
L1_007_000G1_scaffold_451_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12178..12702)
DNA (525bp) protein (175aa)
Aminotransferase class-III n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6U7_9FIRM
Aminotransferase class-III.
Aminotransferase class-III {ECO:0000313|EMBL:CBL15342.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12699..13019)
DNA (321bp) protein (107aa)
Aminotransferase class-III n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6U7_9FIRM
Aminotransferase class-III.
Aminotransferase class-III {ECO:0000313|EMBL:CBL15342.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13281..14180)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83496.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000G1_scaffold_451_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14411..15064
DNA (654bp) protein (218aa)
Two-component system transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTN3_9FIRM
Two-component system transcriptional regulator {ECO:0000313|EMBL:CCX83498.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_451_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15082..16518
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTH7_9FIRM
Signal transduction histidine kinase
L1_007_000G1_scaffold_451_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16508..17281
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E442_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83502.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000G1_scaffold_451_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..18368
DNA (1005bp) protein (335aa)
Uncharacterized protein involved in methicillin resistance n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTP7_9FIRM
Uncharacterized protein involved in methicillin resistance {ECO:0000313|EMBL:CCX83503.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Uncharacterized protein involved in methicillin resistance
L1_007_000G1_scaffold_451_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18459..19310
DNA (852bp) protein (284aa)
Predicted metal-dependent phosphoesterases (PHP family) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6U2_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBL15337.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19447..20286)
DNA (840bp) protein (280aa)
nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000313|EMBL:CBL15335.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBL15335.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=3 Tax=root RepID=D4L6U0_9FIRM
L1_007_000G1_scaffold_451_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20286..21752)
DNA (1467bp) protein (489aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=2 Tax=root RepID=R5DXC0_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CCX83509.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_451_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21890..22075
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6T8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15333.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22160..22342
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82213.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000G1_scaffold_451_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22446..22844)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6T6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15331.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22953..24167)
DNA (1215bp) protein (405aa)
Chloride channel protein EriC n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1X3_9FIRM
Chloride channel protein EriC {ECO:0000313|EMBL:CCX82211.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Chloride channel protein EriC
L1_007_000G1_scaffold_451_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24459..25433
DNA (975bp) protein (325aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Penicillin V acylase and related amidases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTJ4_9FIRM
Penicillin V acylase and related amidases {ECO:0000313|EMBL:CCX82209.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_451_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25480..25668)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DPU8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15327.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_451_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25686..26855)
DNA (1170bp) protein (390aa)
Sodium/glutamate symporter n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1W9_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:CCX82206.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sodium--glutamate symport carrier (gltS)
L1_007_000G1_scaffold_451_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26895..27851)
DNA (957bp) protein (319aa)
TRAP transporter solute receptor TAXI family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTJ1_9FIRM
TRAP transporter solute receptor TAXI family {ECO:0000313|EMBL:CCX82204.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
TRAP transporter solute receptor, TAXI family
L1_007_000G1_scaffold_451_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28018..29124)
DNA (1107bp) protein (369aa)
Cell division protein FtsZ n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPU6_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
cell division protein FtsZ
L1_007_000G1_scaffold_451_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29281..30672)
DNA (1392bp) protein (464aa)
POTRA domain protein FtsQ-type n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E039_9FIRM
POTRA domain protein FtsQ-type {ECO:0000313|EMBL:CCX82202.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ftsQ; Cell division protein ftsQ homolog
Displaying items 1-30 of 151 in total

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