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L1_007_000G1_scaffold_520

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_520_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

147..1184
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32645.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L1_007_000G1_scaffold_520_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1159..1929
DNA (771bp) protein (257aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7B0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY32646.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2027..2665)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6M8_9FIRM
L1_007_000G1_scaffold_520_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2916..5174)
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWY6_9FIRM
L1_007_000G1_scaffold_520_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5316..6212)
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSD8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY32650.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000G1_scaffold_520_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6583..7362
DNA (780bp) protein (260aa)
Uncharacterized domain HDIG n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7B4_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CCY32651.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
uncharacterized domain HDIG
L1_007_000G1_scaffold_520_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7356..7922
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32652.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative metal-dependent hydrolase
L1_007_000G1_scaffold_520_8
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7922..8920
DNA (999bp) protein (333aa)
celA; cellulase CelA (EC:3.2.1.4)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT25516.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L1_007_000G1_scaffold_520_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9015..10241
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32653.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10213..10764
DNA (552bp) protein (184aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Phosphoesterase MJ0936 family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWZ1_9FIRM
phosphoesterase, MJ0936 family
L1_007_000G1_scaffold_520_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10935..11411
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32655.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11408..11770
DNA (363bp) protein (121aa)
LrgA family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7B7_9FIRM
LrgA family protein {ECO:0000313|EMBL:CCY32656.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Putative effector of murein hydrolase LrgA
L1_007_000G1_scaffold_520_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11767..12459
DNA (693bp) protein (231aa)
LrgB family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6N8_9FIRM
LrgB family protein {ECO:0000313|EMBL:CCY32657.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
LrgB family protein
L1_007_000G1_scaffold_520_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12745..13002
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32658.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13013..14002
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97293.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_007_000G1_scaffold_520_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14007..14987
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-(Acetyl-CoA carboxylase) ligase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7D7_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000G1_scaffold_520_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15056..15823)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32682.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15825..16319)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32683.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17205..18359
DNA (1155bp) protein (385aa)
Alanyl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX12_9FIRM
Alanyl-tRNA synthetase {ECO:0000313|EMBL:CCY32684.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Alanyl-tRNA synthetase
L1_007_000G1_scaffold_520_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18658..19548
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32685.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Imidazolonepropionase and related amidohydrolases
L1_007_000G1_scaffold_520_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19529..20686)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32686.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20683..20907)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32687.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000G1_scaffold_520_23
unknown

Not on your lists

21264..21413
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_000G1_scaffold_520_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21436..21996
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32688.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Protein of unknown function (DUF1393).
L1_007_000G1_scaffold_520_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22207..22962)
DNA (756bp) protein (252aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX16_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY32689.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Acetyltransferases
L1_007_000G1_scaffold_520_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23091..23711)
DNA (621bp) protein (207aa)
Lipase/acylhydrolase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSH6_9FIRM
Lipase/acylhydrolase {ECO:0000313|EMBL:CCY32690.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Lysophospholipase L1 and related esterases
L1_007_000G1_scaffold_520_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23987..24496
DNA (510bp) protein (170aa)
Type IV leader peptidase family. (EC:3.4.23.43)
Type IV leader peptidase family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7E5_9FIRM
Type IV leader peptidase family {ECO:0000313|EMBL:CCY32691.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000G1_scaffold_520_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24493..25506
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32692.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000G1_scaffold_520_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25503..26696
DNA (1194bp) protein (398aa)
Type II secretion system protein E n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSF1_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:CCY32693.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pilus assembly protein CpaF
L1_007_000G1_scaffold_520_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26693..27445
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32694.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
Displaying items 1-30 of 74 in total

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