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L1_007_000G1_scaffold_530

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_530_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(313..1335)
DNA (1023bp) protein (341aa)
UPI0003D63BE3 related cluster n=1 Tax=unknown RepID=UPI0003D63BE3
Uncharacterized protein {ECO:0000313|EMBL:ETI83632.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fructose-bisphosphate aldolase
L1_007_000G1_scaffold_530_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1392..2021)
DNA (630bp) protein (210aa)
UPI0003D61B5E related cluster n=1 Tax=unknown RepID=UPI0003D61B5E
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:ETI83633.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tRNA/rRNA methyltransferase SpoU
L1_007_000G1_scaffold_530_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2025..2798)
DNA (774bp) protein (258aa)
UPI0003D6988D related cluster n=1 Tax=unknown RepID=UPI0003D6988D
Short chain dehydrogenase {ECO:0000313|EMBL:ETI83634.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
short-chain dehydrogenase
L1_007_000G1_scaffold_530_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2801..3376)
DNA (576bp) protein (192aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
UPI0003D65DAC related cluster n=1 Tax=unknown RepID=UPI0003D65DAC
L1_007_000G1_scaffold_530_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3418..4209
DNA (792bp) protein (264aa)
UPI0003D62D5B related cluster n=1 Tax=unknown RepID=UPI0003D62D5B
Uncharacterized protein {ECO:0000313|EMBL:ETI83636.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exodeoxyribonuclease III
L1_007_000G1_scaffold_530_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4215..5078)
DNA (864bp) protein (288aa)
UPI0003D61A8D related cluster n=1 Tax=unknown RepID=UPI0003D61A8D
Beta-lactamase {ECO:0000313|EMBL:ETI83637.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
penicillin-binding protein
L1_007_000G1_scaffold_530_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5091..6086)
DNA (996bp) protein (332aa)
UPI0003D5C729 related cluster n=1 Tax=unknown RepID=UPI0003D5C729
TetR family transcriptional regulator {ECO:0000313|EMBL:ETI83638.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TetR family transcriptional regulator
L1_007_000G1_scaffold_530_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6372..8993)
DNA (2622bp) protein (874aa)
UPI0003D66305 related cluster n=1 Tax=unknown RepID=UPI0003D66305
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATP-dependent chaperone ClpB
L1_007_000G1_scaffold_530_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9227..10204)
DNA (978bp) protein (326aa)
UPI0003D64318 related cluster n=1 Tax=unknown RepID=UPI0003D64318
Uncharacterized protein {ECO:0000313|EMBL:ETI83640.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_530_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10244..10687)
DNA (444bp) protein (148aa)
UPI0003D662F4 related cluster n=1 Tax=unknown RepID=UPI0003D662F4
MerR family transcriptional regulator {ECO:0000313|EMBL:ETI83641.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative transcriptional regulator
L1_007_000G1_scaffold_530_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10687..11694)
DNA (1008bp) protein (336aa)
UPI0003D5A950 related cluster n=1 Tax=unknown RepID=UPI0003D5A950
Uncharacterized protein {ECO:0000313|EMBL:ETI83642.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
chaperone DnaJ domain-containing protein
L1_007_000G1_scaffold_530_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11716..12552)
DNA (837bp) protein (279aa)
UPI0003D6065B related cluster n=1 Tax=unknown RepID=UPI0003D6065B
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12658..14535)
DNA (1878bp) protein (626aa)
UPI0003D5E289 related cluster n=1 Tax=unknown RepID=UPI0003D5E289
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
chaperone protein DnaK
L1_007_000G1_scaffold_530_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14939..15367
DNA (429bp) protein (143aa)
UPI0003D5E7FF related cluster n=1 Tax=unknown RepID=UPI0003D5E7FF
Uncharacterized protein {ECO:0000313|EMBL:ETI83645.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GNAT family acetyltransferase
L1_007_000G1_scaffold_530_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15629..16477
DNA (849bp) protein (283aa)
UPI0003D5B79C related cluster n=1 Tax=unknown RepID=UPI0003D5B79C
Uncharacterized protein {ECO:0000313|EMBL:ETI83646.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Aldo/keto reductases related to diketogulonate reductase
L1_007_000G1_scaffold_530_16
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16904..18601)
DNA (1698bp) protein (566aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
glucose-6-phosphate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5D129
glucose-6-phosphate isomerase
L1_007_000G1_scaffold_530_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18629..20893)
DNA (2265bp) protein (755aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00016842}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00016842};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pfkL; 6-phosphofructokinase (EC:2.7.1.11)
UPI0003D5DE3B related cluster n=1 Tax=unknown RepID=UPI0003D5DE3B
L1_007_000G1_scaffold_530_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20919..21761)
DNA (843bp) protein (281aa)
UPI0003D6145A related cluster n=1 Tax=unknown RepID=UPI0003D6145A
Uncharacterized protein {ECO:0000313|EMBL:ETI83649.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LacI family transcriptional regulator
L1_007_000G1_scaffold_530_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21969..23195)
DNA (1227bp) protein (409aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D612F5 related cluster n=1 Tax=unknown RepID=UPI0003D612F5
isocitrate dehydrogenase [NADP]
L1_007_000G1_scaffold_530_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23385..24128
DNA (744bp) protein (248aa)
UPI0003D5B4A3 related cluster n=1 Tax=unknown RepID=UPI0003D5B4A3
Uncharacterized protein {ECO:0000313|EMBL:ETI83651.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_530_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24233..24676)
DNA (444bp) protein (148aa)
UPI0003D59E66 related cluster n=1 Tax=unknown RepID=UPI0003D59E66
Heat shock protein Hsp20 {ECO:0000313|EMBL:ETI83652.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
heat shock protein Hsp20
L1_007_000G1_scaffold_530_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24971..25516
DNA (546bp) protein (182aa)
UPI0003D60CF2 related cluster n=1 Tax=unknown RepID=UPI0003D60CF2
Uncharacterized protein {ECO:0000313|EMBL:ETI83653.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25531..26568)
DNA (1038bp) protein (346aa)
UPI0003D67745 related cluster n=1 Tax=unknown RepID=UPI0003D67745
Uncharacterized protein {ECO:0000313|EMBL:ETI83654.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_530_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26746..27240
DNA (495bp) protein (165aa)
UPI0003D6054B related cluster n=1 Tax=unknown RepID=UPI0003D6054B
Stress-like protein gls24 {ECO:0000313|EMBL:ETI83655.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
stress response protein
L1_007_000G1_scaffold_530_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27263..27457
DNA (195bp) protein (65aa)
UPI0003D687EC related cluster n=1 Tax=unknown RepID=UPI0003D687EC
Uncharacterized protein {ECO:0000313|EMBL:ETI83656.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27470..27826
DNA (357bp) protein (119aa)
UPI0003D63A2B related cluster n=1 Tax=unknown RepID=UPI0003D63A2B
Uncharacterized protein {ECO:0000313|EMBL:ETI83657.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_530_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27823..28419
DNA (597bp) protein (199aa)
UPI0003D63993 related cluster n=1 Tax=unknown RepID=UPI0003D63993
DNA/RNA endonuclease G, NUC1 {ECO:0000313|EMBL:ETI83658.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28416..29042
DNA (627bp) protein (209aa)
UPI0003D63775 related cluster n=1 Tax=unknown RepID=UPI0003D63775
Uncharacterized protein {ECO:0000313|EMBL:ETI83659.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29062..29307
DNA (246bp) protein (82aa)
UPI0003D6199D related cluster n=1 Tax=unknown RepID=UPI0003D6199D
Uncharacterized protein {ECO:0000313|EMBL:ETI83660.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_530_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29460..30806)
DNA (1347bp) protein (449aa)
UPI0003D5DE35 related cluster n=1 Tax=unknown RepID=UPI0003D5DE35
Uncharacterized protein {ECO:0000313|EMBL:ETI83661.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
Displaying items 1-30 of 70 in total

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