ggKbase home page

L1_007_000G1_scaffold_538

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_538_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..309)
DNA (309bp) protein (103aa)
Putative porin n=1 Tax=Klebsiella pneumoniae (strain 342) RepID=B5Y2L0_KLEP3
LamB
Putative porin {ECO:0000313|EMBL:ACI11131.1}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L1_007_000G1_scaffold_538_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(579..1898)
DNA (1320bp) protein (440aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Enterococcus gallinarum EGD-AAK12 RepID=U1EMX9_ENTGA
L1_007_000G1_scaffold_538_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2310..3764
DNA (1455bp) protein (485aa)
Xyloside permease n=7 Tax=Klebsiella RepID=B5Y2L3_KLEP3
Na+/xyloside symporter related transporter
Xyloside permease {ECO:0000313|EMBL:ACI07331.1}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L1_007_000G1_scaffold_538_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3823..5502
DNA (1680bp) protein (560aa)
xynB_2; Beta-xylosidase (EC:3.2.1.37)
Beta-xylosidase n=3 Tax=Klebsiella pneumoniae RepID=U6T0U2_KLEPN
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:EWD74889.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L1_007_000G1_scaffold_538_5
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5637..6122)
DNA (486bp) protein (162aa)
Type VI secretion system effector Hcp1 family n=1 Tax=Klebsiella variicola CAG:634 RepID=R5X6X5_9ENTR
Type VI secretion system secreted protein Hcp {ECO:0000313|EMBL:EWD74888.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
type VI secretion system effector
L1_007_000G1_scaffold_538_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6124..6642)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5XHY6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EWD74887.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
hypothetical protein
L1_007_000G1_scaffold_538_7
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6635..7138)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5WL31_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CEL87429.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
hypothetical protein
L1_007_000G1_scaffold_538_8
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8685..9359
DNA (675bp) protein (225aa)
Uncharacterized protein n=82 Tax=Klebsiella pneumoniae RepID=G8VTH5_KLEPH
Uncharacterized protein {ECO:0000313|EMBL:EWD74885.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
hypothetical protein
L1_007_000G1_scaffold_538_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9361..9708
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5WNG6_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWD74884.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L1_007_000G1_scaffold_538_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9711..10130
DNA (420bp) protein (140aa)
Hcp1 family type VI secretion system effector n=9 Tax=Klebsiella RepID=D6GLC1_9ENTR
Hcp1 family type VI secretion system effector
HcpA_3 protein {ECO:0000313|EMBL:CEN64949.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
L1_007_000G1_scaffold_538_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10543..10668
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=S1FKI4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EWD74882.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
transposase
L1_007_000G1_scaffold_538_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11040..11525
DNA (486bp) protein (162aa)
Transposase for insertion element IS1222 n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UPA9_YERRU
Uncharacterized protein {ECO:0000313|EMBL:EWD74881.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
transposase
L1_007_000G1_scaffold_538_13
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11893..13968
DNA (2076bp) protein (692aa)
5-methylcytosine-specific restriction enzyme with GTPase activity n=2 Tax=Klebsiella pneumoniae RepID=G0GI41_KLEPN
5-methylcytosine-specific restriction enzyme with GTPase activity
Restriction endonuclease {ECO:0000313|EMBL:ERE60852.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
L1_007_000G1_scaffold_538_14
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13961..15322
DNA (1362bp) protein (454aa)
5-methylcytosine restriction system component n=3 Tax=Bacteria RepID=G0GI40_KLEPN
5-methylcytosine restriction system component
Restriction endonuclease {ECO:0000313|EMBL:ERE60853.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
L1_007_000G1_scaffold_538_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15375..16127)
DNA (753bp) protein (251aa)
Transposase n=2 Tax=Klebsiella RepID=D6GNF5_9ENTR
IS3 family element, transposase orfB
IS3 family element, transposase orfB {ECO:0000313|EMBL:ACI12067.1}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L1_007_000G1_scaffold_538_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16208..16474)
DNA (267bp) protein (89aa)
IS3 family element, transposase orfA n=3 Tax=Klebsiella RepID=B5RJU3_KLEP3
IS3 family element, transposase orfA
IS3 family element, transposase orfA {ECO:0000313|EMBL:ACI12154.1}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L1_007_000G1_scaffold_538_17
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16892..17725
DNA (834bp) protein (278aa)
von Willebrand factor type A n=1 Tax=Serratia sp. S4 RepID=UPI0003764ACF
von Willebrand factor A {ECO:0000313|EMBL:KJN17415.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
von Willebrand factor A
L1_007_000G1_scaffold_538_18
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17733..18452
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Serratia sp. S4 RepID=UPI00036206AA
Uncharacterized protein {ECO:0000313|EMBL:KJN17416.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
hypothetical protein
L1_007_000G1_scaffold_538_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18466..20151
DNA (1686bp) protein (562aa)
serine/threonine protein kinase n=1 Tax=Serratia sp. S4 RepID=UPI000360EF9D
Uncharacterized protein {ECO:0000313|EMBL:KGM61601.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
serine/threonine protein kinase
L1_007_000G1_scaffold_538_20
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20298..22007
DNA (1710bp) protein (570aa)
DNA methyltransferase n=4 Tax=Salmonella enterica subsp. enterica serovar Cubana RepID=S5HRK8_SALET
Restriction endonuclease HindVIIP subunit M {ECO:0000313|EMBL:KJN17418.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
DNA methyltransferase
L1_007_000G1_scaffold_538_21
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21997..23397
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 44 RepID=V3KEE8_KLEPN
restriction modification system DNA specificity domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
L1_007_000G1_scaffold_538_22
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23397..26528
DNA (3132bp) protein (1044aa)
Type I restriction-modification system restriction subunit R n=1 Tax=Salmonella enterica subsp. enterica serovar Hvittingfoss str. A4-620 RepID=G5N320_SALET
Type I restriction-modification system restriction subunit R {ECO:0000313|EMBL:EHC46234.1}; TaxID=913073 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Hvittingfoss str. A4-620.;"
DEAD/DEAH box helicase
L1_007_000G1_scaffold_538_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26534..27085
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli M605 RepID=F4T875_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI12953.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
hypothetical protein
L1_007_000G1_scaffold_538_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27100..27900
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Salmonella choleraesuis RepID=UPI0003BB3192
Uncharacterized protein {ECO:0000313|EMBL:ELX27318.1}; TaxID=687914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Rissen str. 150.;"
hypothetical protein
L1_007_000G1_scaffold_538_25
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28303..28443)
DNA (141bp) protein (47aa)
HNH nuclease n=3 Tax=Escherichia coli RepID=E0J2E4_ECOLW
HNH nuclease
HNH nuclease {ECO:0000313|EMBL:ESH13901.1}; TaxID=941190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997.;"
L1_007_000G1_scaffold_538_26
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28434..29156)
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Salmonella enterica subsp. enterica serovar Cubana RepID=S5I1V6_SALET
hypothetical protein
Restriction endonuclease {ECO:0000313|EMBL:KJF84307.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L1_007_000G1_scaffold_538_27
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29372..29533)
DNA (162bp) protein (54aa)
integrase n=1 Tax=Klebsiella pneumoniae RepID=UPI00030E0E2F
integrase
Integrase {ECO:0000313|EMBL:KJF84308.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L1_007_000G1_scaffold_538_28
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29561..30124)
DNA (564bp) protein (188aa)
Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 8400 RepID=V1LBH2_SALSE
Integrase {ECO:0000313|EMBL:KJF84308.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
integrase
L1_007_000G1_scaffold_538_29
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30161..30490)
DNA (330bp) protein (110aa)
Phage integrase family protein n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WIC3_KLEOK
phage integrase family protein
Integrase {ECO:0000313|EMBL:KJP60403.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L1_007_000G1_scaffold_538_30
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30500..30637)
DNA (138bp) protein (46aa)
Prophage p4 integrase n=1 Tax=Photorhabdus temperata subsp. temperata M1021 RepID=T0QK05_PHOTE
Prophage p4 integrase {ECO:0000313|EMBL:EQB99862.1}; TaxID=1221520 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus temperata subsp. temperata M1021.;"
phage integrase family protein
Displaying items 1-30 of 124 in total

View Taxonomy