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L1_007_000G1_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_543_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPY2_9BIFI
Permease protein of ABC transporter system for sugars, galactan metabolism
ABC transporter permease component {ECO:0000313|EMBL:BAR03192.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EEG71545.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR04231.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_007_000G1_scaffold_543_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139..2208
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Beta-galactosidase n=2 Tax=Bifidobacterium RepID=C0BPY1_9BIFI
beta-galactosidase
L1_007_000G1_scaffold_543_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2307..3866)
DNA (1560bp) protein (520aa)
alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein n=2 Tax=Bifidobacterium RepID=C0BPY0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14811.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L1_007_000G1_scaffold_543_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4145..5503
DNA (1359bp) protein (453aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium RepID=C0BPX9_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG71542.1}; Sugar ABC transporter substrate binding component {ECO:0000313|EMBL:BAR03195.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sugars ABC transporter substrate-binding protein
L1_007_000G1_scaffold_543_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5716..7128
DNA (1413bp) protein (471aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX8_9BIFI
Sugar ABC transporter substrate binding component {ECO:0000313|EMBL:BAR03196.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter substrate-binding protein
L1_007_000G1_scaffold_543_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7240..8013)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Type III pantothenate kinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX4_9BIFI
pantothenate kinase
L1_007_000G1_scaffold_543_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8072..9355)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUA8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14820.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
phosphopantothenoylcysteine decarboxylase
L1_007_000G1_scaffold_543_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9549..11204
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8E3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14821.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
solute binding protein of ABC transporter systemy for peptides
L1_007_000G1_scaffold_543_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11394..12374
DNA (981bp) protein (327aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BPX1_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEF28636.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
peptide ABC transporter permease
L1_007_000G1_scaffold_543_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12371..13291
DNA (921bp) protein (307aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX0_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEG71533.1}; Peptides ABC transporter permease component {ECO:0000313|EMBL:BAR03204.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter permease
L1_007_000G1_scaffold_543_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13288..14073
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUB3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14825.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
peptide ABC transporter ATP-binding protein
L1_007_000G1_scaffold_543_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14085..14864
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8E8_9BIFI
Peptides ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR03206.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter ATP-binding protein
L1_007_000G1_scaffold_543_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15302..16312
DNA (1011bp) protein (337aa)
Putative cystathionine beta-synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX85_9BIFI
cystathionine beta-synthase
Putative cystathionine beta-synthase {ECO:0000313|EMBL:EEB20675.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L1_007_000G1_scaffold_543_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16392..17573
DNA (1182bp) protein (394aa)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX86_9BIFI
cystathionine gamma-synthase
Cystathionine gamma-synthase {ECO:0000313|EMBL:AIZ14134.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_000G1_scaffold_543_15
unknown

Not on your lists

17725..17853
DNA (129bp) protein (43aa)

This feature has no annotations

L1_007_000G1_scaffold_543_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17881..19806
DNA (1926bp) protein (642aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPW3_9BIFI
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AIZ14135.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_000G1_scaffold_543_17
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19973..20458
DNA (486bp) protein (162aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
S-ribosylhomocysteine lyase n=2 Tax=Bifidobacterium RepID=C0BPW2_9BIFI
S-ribosylhomocysteinase
L1_007_000G1_scaffold_543_18
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20566..21102
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX89_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB20679.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
histone acetyltransferase
L1_007_000G1_scaffold_543_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21300..22727)
DNA (1428bp) protein (476aa)
Amino acid transporter n=2 Tax=Bifidobacterium RepID=C0BPV9_9BIFI
amino acid permease
Amino acid permease {ECO:0000313|EMBL:KEF28627.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L1_007_000G1_scaffold_543_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22836..24329
DNA (1494bp) protein (498aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Alanine racemase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV8_9BIFI
alanine racemase
L1_007_000G1_scaffold_543_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24435..26519
DNA (2085bp) protein (695aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DNA primase n=2 Tax=Bifidobacterium RepID=C0BPV7_9BIFI
DNA primase
L1_007_000G1_scaffold_543_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26880..28076
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUM1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14925.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
citrate transporter
L1_007_000G1_scaffold_543_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28380..30392
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2J0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14924.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
GTP-binding protein
L1_007_000G1_scaffold_543_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30906..31532)
DNA (627bp) protein (209aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV3_9BIFI
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEF28619.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
acetyltransferase
L1_007_000G1_scaffold_543_25
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31805..32461
DNA (657bp) protein (219aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX99_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEB20689.1}; Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAR01453.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
polar amino acid ABC transporter permease
L1_007_000G1_scaffold_543_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32448..33122
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BPV0_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEG71513.1}; Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAR03222.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
amino acid ABC transporter permease
L1_007_000G1_scaffold_543_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33115..33951
DNA (837bp) protein (279aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPU9_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG71512.1}; Amino acid ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR03223.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
glutamine ABC transporter ATP-binding protein
L1_007_000G1_scaffold_543_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34024..34932
DNA (909bp) protein (303aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPU8_9BIFI
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF28615.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
amino acid ABC transporter substrate-binding protein
L1_007_000G1_scaffold_543_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35187..36209
DNA (1023bp) protein (341aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
2-dehydropantoate 2-reductase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4P7_BIFAD
2-dehydropantoate 2-reductase
L1_007_000G1_scaffold_543_30
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36249..37124
DNA (876bp) protein (292aa)
Lipoprotein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XXB4_9BIFI
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
methionine ABC transporter ATPase
Displaying items 1-30 of 67 in total

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