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L1_007_000G1_scaffold_560

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_560_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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24..1778
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30893.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
signaling protein
L1_007_000G1_scaffold_560_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1812..2711
DNA (900bp) protein (300aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGP8_CLOSV
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS06258.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
diguanylate cyclase (GGDEF) domain
L1_007_000G1_scaffold_560_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2756..3817)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30891.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
pilus retraction protein PilT
L1_007_000G1_scaffold_560_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3833..4327)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30890.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_560_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4376..4846)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGQ2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06262.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_000G1_scaffold_560_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4843..5328)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30888.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_560_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5331..5663)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGQ4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30887.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_560_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5677..6726)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30886.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Type II secretory pathway, component PulF
L1_007_000G1_scaffold_560_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6753..7679)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30885.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Transglutaminase-like enzymes, putative cysteine proteases
L1_007_000G1_scaffold_560_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7706..8692)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGQ7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06267.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_000G1_scaffold_560_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8714..9400)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30883.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
GGDEF domain-containing protein
L1_007_000G1_scaffold_560_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9520..10077
DNA (558bp) protein (186aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPQ8_9FIRM
L1_007_000G1_scaffold_560_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10153..11523
DNA (1371bp) protein (457aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridiales RepID=B0NGR0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30881.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_000G1_scaffold_560_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11867..15016
DNA (3150bp) protein (1050aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Clostridiales RepID=B0NGR2_CLOSV
L1_007_000G1_scaffold_560_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15052..17514
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPQ6_9FIRM
L1_007_000G1_scaffold_560_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17517..18137
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGR4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30878.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_560_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18180..19064
DNA (885bp) protein (295aa)
SpoIID/LytB domain protein n=2 Tax=Clostridiales RepID=B0NGR5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30877.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
spoIID; stage II sporulation protein D
L1_007_000G1_scaffold_560_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19109..19861
DNA (753bp) protein (251aa)
Peptidase, M23 family n=2 Tax=Clostridiales RepID=B0NGR6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30876.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Membrane-bound metallopeptidase
L1_007_000G1_scaffold_560_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19963..20226
DNA (264bp) protein (88aa)
GIY-YIG catalytic domain protein n=2 Tax=Clostridiales RepID=B0NGR7_CLOSV
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EDS06277.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted endonuclease containing a URI domain
L1_007_000G1_scaffold_560_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20258..20920)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30874.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
channel protein, hemolysin III family
L1_007_000G1_scaffold_560_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21147..21749
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGR9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06279.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_000G1_scaffold_560_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21829..22365)
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridiales RepID=B0NGS0_CLOSV
Rubrerythrin {ECO:0000313|EMBL:EDS06280.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
rubrerythrin
L1_007_000G1_scaffold_560_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22487..23029)
DNA (543bp) protein (181aa)
Rubredoxin n=2 Tax=Clostridiales RepID=B0NGS1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30871.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Rubrerythrin
L1_007_000G1_scaffold_560_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23138..23536)
DNA (399bp) protein (133aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridiales RepID=B0NGS2_CLOSV
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDS06282.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Fe2+/Zn2+ uptake regulation proteins
L1_007_000G1_scaffold_560_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23808..24710
DNA (903bp) protein (301aa)
NlpC/P60 family protein n=2 Tax=Clostridiales RepID=B0NGS3_CLOSV
NlpC/P60 family protein {ECO:0000313|EMBL:EDS06283.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_000G1_scaffold_560_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25132..25233
DNA (102bp) protein (34aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Clostridiales RepID=B0NGS5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30868.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_000G1_scaffold_560_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25426..26169)
DNA (744bp) protein (248aa)
Negative regulator of genetic competence (MecA) n=2 Tax=Clostridiales RepID=B0NGS6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30867.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Negative regulator of genetic competence, sporulation and motility
L1_007_000G1_scaffold_560_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26449..26649
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30866.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_000G1_scaffold_560_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26597..26869
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGS8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30865.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_560_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26924..28996
DNA (2073bp) protein (691aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30864.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted glycosyl hydrolase
Displaying items 1-30 of 76 in total

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