ggKbase home page

L1_007_000G1_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_568_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1..105
DNA (105bp) protein (35aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS20040.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS20040.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N0L2_9FIRM
L1_007_000G1_scaffold_568_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

208..390
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=6 Tax=Erysipelotrichaceae RepID=B0N0L1_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpsU; 30S ribosomal protein S21
L1_007_000G1_scaffold_568_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1524..1715
DNA (192bp) protein (64aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31711.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_000G1_scaffold_568_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1712..2632
DNA (921bp) protein (307aa)
Putative sporulation protein YqfD n=2 Tax=Erysipelotrichaceae RepID=B0N0N2_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:EDS20036.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_000G1_scaffold_568_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2633..3589
DNA (957bp) protein (319aa)
PhoH family protein n=5 Tax=Erysipelotrichaceae RepID=B0N0N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92593.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PhoH family protein
L1_007_000G1_scaffold_568_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3582..4256
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N0N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45226.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
two-component system response regulator
L1_007_000G1_scaffold_568_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4249..5466
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N0M9_9FIRM
alkaline phosphatase
L1_007_000G1_scaffold_568_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5574..6773
DNA (1200bp) protein (400aa)
Trypsin n=4 Tax=Erysipelotrichaceae RepID=B0N0M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92597.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
serine protease
L1_007_000G1_scaffold_568_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6900..7457
DNA (558bp) protein (186aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31706.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_000G1_scaffold_568_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7718..8362
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N0Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92599.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_000G1_scaffold_568_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8364..8723
DNA (360bp) protein (120aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Methylglyoxal synthase n=4 Tax=Erysipelotrichaceae RepID=B0N0Z3_9FIRM
mgsA; methylglyoxal synthase
L1_007_000G1_scaffold_568_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8797..9033
DNA (237bp) protein (79aa)
DNA-binding helix-turn-helix protein n=5 Tax=Erysipelotrichaceae RepID=B0N0Z2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS20028.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Transcriptional regulator, HTH-type
L1_007_000G1_scaffold_568_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9026..9439
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS20027.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative membrane protein
L1_007_000G1_scaffold_568_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9550..9849
DNA (300bp) protein (100aa)
Transposase, IS4 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZ41_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EDS75688.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L1_007_000G1_scaffold_568_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10322..10498)
DNA (177bp) protein (59aa)
Ferredoxin n=5 Tax=Erysipelotrichaceae RepID=B0N0Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35218.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ferredoxin
L1_007_000G1_scaffold_568_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10616..11563
DNA (948bp) protein (316aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35217.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_000G1_scaffold_568_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11606..12274
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=4 Tax=Erysipelotrichaceae RepID=B0N0Y8_9FIRM
L1_007_000G1_scaffold_568_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12276..13580
DNA (1305bp) protein (435aa)
GTPase Der n=5 Tax=Erysipelotrichaceae RepID=B0N0Y7_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ribosome-associated GTPase EngA
L1_007_000G1_scaffold_568_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13642..14646
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=5 Tax=Erysipelotrichaceae RepID=B0N0Y6_9FIRM
L1_007_000G1_scaffold_568_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14686..14928
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35212.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_000G1_scaffold_568_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15022..15534
DNA (513bp) protein (171aa)
Putative ACR, COG1399 n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0Y4_9FIRM
Putative ACR, COG1399 {ECO:0000313|EMBL:EDS20020.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_000G1_scaffold_568_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


15551..15718
DNA (168bp) protein (56aa)
50S ribosomal protein L32 n=5 Tax=Erysipelotrichaceae RepID=B0N0Y3_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rpmF; 50S ribosomal protein L32
L1_007_000G1_scaffold_568_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15917..16348
DNA (432bp) protein (144aa)
Protein MraZ n=5 Tax=Erysipelotrichaceae RepID=C3RN20_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mraZ; Cell division protein
L1_007_000G1_scaffold_568_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16358..17302
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Ribosomal RNA small subunit methyltransferase H n=5 Tax=Erysipelotrichaceae RepID=B0N0Y1_9FIRM
mraW; S-adenosyl-methyltransferase MraW
L1_007_000G1_scaffold_568_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17292..17591
DNA (300bp) protein (100aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35207.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_000G1_scaffold_568_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17591..19729
DNA (2139bp) protein (713aa)
Penicillin-binding protein 2B n=5 Tax=Erysipelotrichaceae RepID=B0N0X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92615.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
pbpB; penicillin-binding protein 2B
L1_007_000G1_scaffold_568_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19775..21676
DNA (1902bp) protein (634aa)
Stage V sporulation protein D n=4 Tax=Erysipelotrichaceae RepID=C3RN24_9FIRM
Stage V sporulation protein D {ECO:0000313|EMBL:EHQ45205.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
stage V sporulation protein D
L1_007_000G1_scaffold_568_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21713..23041
DNA (1329bp) protein (443aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G9QZG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35152.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_000G1_scaffold_568_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23074..24381
DNA (1308bp) protein (436aa)
yfjO; RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Erysipelotrichaceae RepID=C3RN26_9FIRM
Putative 23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDS20011.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_000G1_scaffold_568_30
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24443..24688
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N0X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92619.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
Displaying items 1-30 of 121 in total

View Taxonomy