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L1_007_000G1_scaffold_604

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Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_604_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..359
DNA (357bp) protein (119aa)
Phage late control gene D protein (GPD) n=4 Tax=Roseburia RepID=D4KPW7_9FIRM
Phage late control gene D protein (GPD).
Uncharacterized protein {ECO:0000313|EMBL:EEG92287.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L1_007_000G1_scaffold_604_2
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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385..1590
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DJ96_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN54025.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000G1_scaffold_604_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1897..2136)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTY7_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70084.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_007_000G1_scaffold_604_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2318..3037
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LTK5_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD66691.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L1_007_000G1_scaffold_604_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3266..5464
DNA (2199bp) protein (733aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
DNA topoisomerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UB31_9CLOT
DNA topoisomerase III
L1_007_000G1_scaffold_604_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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5606..7225
DNA (1620bp) protein (540aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJP3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ34991.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_000G1_scaffold_604_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7227..9023
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4P7_9FIRM
L1_007_000G1_scaffold_604_8
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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9013..10020
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JNE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32657.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
periplasmic binding protein/LacI transcriptional regulator
L1_007_000G1_scaffold_604_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10183..11697
DNA (1515bp) protein (505aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Ribose ABC transporter ATP-binding protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YZ38_9CLOT
L1_007_000G1_scaffold_604_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11710..12735
DNA (1026bp) protein (342aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Ribose transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4M7_9FIRM
Ribose transport system permease {ECO:0000313|EMBL:EGN43521.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_007_000G1_scaffold_604_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12750..13841
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71929.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
periplasmic binding protein/LacI transcriptional regulator
L1_007_000G1_scaffold_604_12
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13945..14373
DNA (429bp) protein (143aa)
RbsD/FucU transport family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDQ5_9CLOT
RbsD/FucU transport family protein {ECO:0000313|EMBL:EEG30402.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
fucU; fucose operon protein FucU
L1_007_000G1_scaffold_604_13
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14376..15143
DNA (768bp) protein (256aa)
Cof-like hydrolase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNM8_CLOPH
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ABX41629.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000G1_scaffold_604_14
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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15270..16031
DNA (762bp) protein (254aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ63_9FIRM
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CDD65825.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
class II aldolase/adducin family protein
L1_007_000G1_scaffold_604_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16045..18567
DNA (2523bp) protein (841aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Formate C-acetyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHD0_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:EKY27419.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L1_007_000G1_scaffold_604_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18584..19375
DNA (792bp) protein (264aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Putative pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIC4_9CLOT
Putative pyruvate formate-lyase 1-activating enzyme {ECO:0000313|EMBL:EKY27420.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L1_007_000G1_scaffold_604_17
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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19400..19768
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65827.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
microcompartments protein
L1_007_000G1_scaffold_604_18
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19771..20193
DNA (423bp) protein (141aa)
Ethanolamine/propanediol utilization protein PduV3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGX2_ACEWD
pduV3; ethanolamine/propanediol utilization protein PduV3
Ethanolamine/propanediol utilization protein PduV3 {ECO:0000313|EMBL:AFA49636.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L1_007_000G1_scaffold_604_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20220..21020
DNA (801bp) protein (267aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
L-ribulose-5-phosphate 4-epimerase n=3 Tax=Lachnospiraceae RepID=V8BQE1_RUMGN
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EDN78610.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L1_007_000G1_scaffold_604_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21043..21519
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67284.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
L1_007_000G1_scaffold_604_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21489..22895
DNA (1407bp) protein (469aa)
Aldehyde Dehydrogenase_ n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KN57_CLOPH
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ABX41556.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000G1_scaffold_604_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22911..24125
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U813_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67286.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_007_000G1_scaffold_604_23
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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24145..24459
DNA (315bp) protein (105aa)
Bacterial microcompartments protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XFI6_9FIRM
Bacterial microcompartments protein {ECO:0000313|EMBL:CDA13600.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000G1_scaffold_604_24
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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24521..24799
DNA (279bp) protein (93aa)
Microcompartments protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BKF5_THEXL
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AEF18102.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
L1_007_000G1_scaffold_604_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24830..25108
DNA (279bp) protein (93aa)
Microcompartments protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KN60_CLOPH
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ABX41559.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000G1_scaffold_604_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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25131..25544
DNA (414bp) protein (138aa)
Propanediol utilization protein PduA n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JET3_9FIRM
Propanediol utilization protein PduA {ECO:0000313|EMBL:EOS32628.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000G1_scaffold_604_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25570..26217
DNA (648bp) protein (216aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Phosphate propanoyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z0E3_9CLOT
propanediol utilization protein
L1_007_000G1_scaffold_604_28
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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26230..26493
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BL39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65818.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L1_007_000G1_scaffold_604_29
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

26501..27841
DNA (1341bp) protein (447aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJY3_9FIRM
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:CDD65817.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L1_007_000G1_scaffold_604_30
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

27929..28477
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65816.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
Displaying items 1-30 of 141 in total

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