ggKbase home page

L1_007_000G1_scaffold_616

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_616_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71..1144)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWM8_BACV8
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:KDS26457.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_616_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1155..3041)
DNA (1887bp) protein (629aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWM9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR37843.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000G1_scaffold_616_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3075..3458)
DNA (384bp) protein (128aa)
Transcriptional regulator, BlaI/MecI/CopY family n=15 Tax=Bacteroides RepID=C6Z361_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04101.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transcriptional regulator
L1_007_000G1_scaffold_616_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3648..4871)
DNA (1224bp) protein (408aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=C6Z362_9BACE
Glycoside hydrolase family 88 {ECO:0000313|EMBL:EFV66076.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
L1_007_000G1_scaffold_616_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4889..6538)
DNA (1650bp) protein (550aa)
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase n=5 Tax=Bacteroides RepID=A6KWN2_BACV8
beta-xylosidase/alpha-L-arabinofuranosidase
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EET15322.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000G1_scaffold_616_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6692..7225)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U6R5_BACVU
Glycoside hydrolase 97 family protein {ECO:0000313|EMBL:KDS26463.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycoside hydrolase
L1_007_000G1_scaffold_616_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7222..8589)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJI5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04104.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L1_007_000G1_scaffold_616_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8731..11367)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z365_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15324.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000G1_scaffold_616_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11374..12459)
DNA (1086bp) protein (362aa)
Beta-lactamase n=2 Tax=Bacteroides RepID=C6Z366_9BACE
Beta-lactamase class C {ECO:0000313|EMBL:EFV66072.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
beta-lactamase class C
L1_007_000G1_scaffold_616_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12537..14459)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z367_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15326.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000G1_scaffold_616_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14586..15971)
DNA (1386bp) protein (462aa)
Glycoside hydrolase family 28 n=2 Tax=Bacteroides vulgatus RepID=A6KWN7_BACV8
glycoside hydrolase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ABR37851.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000G1_scaffold_616_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16067..16384)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HSC6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS26459.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000G1_scaffold_616_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16544..17563)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U6R0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EFV66069.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_000G1_scaffold_616_14
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17847..18767)
DNA (921bp) protein (307aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8W7Y7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB37541.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
hypothetical protein
L1_007_000G1_scaffold_616_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18958..20394)
DNA (1437bp) protein (479aa)
Glycoside hydrolase family 28 n=2 Tax=Bacteroides vulgatus RepID=A6KWP0_BACV8
glycoside hydrolase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ABR37854.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000G1_scaffold_616_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20594..22621)
DNA (2028bp) protein (676aa)
SusD family protein n=2 Tax=Bacteroides RepID=C6Z378_9BACE
SusD family protein {ECO:0000313|EMBL:EET15337.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000G1_scaffold_616_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22644..25970)
DNA (3327bp) protein (1109aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z379_9BACE
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS26472.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_616_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26014..26529)
DNA (516bp) protein (172aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6KWP3_BACV8
RNA polymerase ECF-type sigma factor
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS04115.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_616_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26720..29533)
DNA (2814bp) protein (938aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IV33_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77634.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transcriptional regulator
L1_007_000G1_scaffold_616_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29692..32430)
DNA (2739bp) protein (913aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U6Q3_BACVU
Heparinase II/III-like protein {ECO:0000313|EMBL:EFG17779.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000G1_scaffold_616_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32520..34133)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZRB8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04118.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000G1_scaffold_616_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34257..36623
DNA (2367bp) protein (789aa)
Beta-glucosidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJK2_BACVU
Beta-glucosidase {ECO:0000313|EMBL:EOS04119.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase family protein
L1_007_000G1_scaffold_616_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37195..37581
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z385_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66051.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_000G1_scaffold_616_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37713..39563
DNA (1851bp) protein (617aa)
Permease, YjgP/YjgQ family n=4 Tax=Bacteroides RepID=C6Z386_9BACE
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EET15345.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000G1_scaffold_616_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39566..40780
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=7 Tax=Bacteroides RepID=RIBBA_BACV8
GTP cyclohydrolase II
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000G1_scaffold_616_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40906..42099
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=3 Tax=Bacteroides RepID=A6KWQ8_BACV8
aspartate aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:KDS54665.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000G1_scaffold_616_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42277..42444)
DNA (168bp) protein (56aa)
Ferredoxin n=14 Tax=Bacteroides RepID=C3PWD1_9BACE
4Fe-4S ferredoxin
Ferredoxin {ECO:0000313|EMBL:EET15348.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000G1_scaffold_616_28
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42562..45540)
DNA (2979bp) protein (993aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Glycoside hydrolase family 3 n=2 Tax=Bacteroides RepID=R7NY06_9BACE
glycoside hydrolase family protein
L1_007_000G1_scaffold_616_29
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45586..46428)
DNA (843bp) protein (281aa)
5'-nucleotidase n=4 Tax=Bacteroides RepID=A6KWR0_BACV8
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:CDF17577.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000G1_scaffold_616_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46440..47219)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9TUA2_BACVU
5'-nucleotidase
Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase {ECO:0000313|EMBL:ABR37875.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying items 1-30 of 55 in total

View Taxonomy