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L1_007_000G1_scaffold_742

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_742_1
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(352..1743)
DNA (1392bp) protein (464aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. M62/1 RepID=D4C6I7_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE14175.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
integrase family protein
L1_007_000G1_scaffold_742_2
unknown

Not on your lists

comp(1694..1822)
DNA (129bp) protein (43aa)

This feature has no annotations

L1_007_000G1_scaffold_742_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1824..3143)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LL36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56457.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integrase family protein
L1_007_000G1_scaffold_742_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3156..3341)
DNA (186bp) protein (62aa)
DNA binding domain, excisionase family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9M9_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEC90531.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA binding domain, excisionase family
L1_007_000G1_scaffold_742_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3401..3763)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
mRNA interferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G757_9FIRM
Growth inhibitor
L1_007_000G1_scaffold_742_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4243..4668)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G758_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06136.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Sigma-70, region 4.
L1_007_000G1_scaffold_742_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4732..5085)
DNA (354bp) protein (118aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ87_CLODI
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EQJ55312.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L1_007_000G1_scaffold_742_8
unknown

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comp(5257..5490)
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_000G1_scaffold_742_9
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5589..6164)
DNA (576bp) protein (192aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MLX2_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS71783.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L1_007_000G1_scaffold_742_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6599..6808
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCS1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF66220.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative transcriptional regulator
L1_007_000G1_scaffold_742_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6819..7409
DNA (591bp) protein (197aa)
Putative inner membrane protein (DUF1819) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0V0_9FIRM
Putative inner membrane protein (DUF1819).
Putative inner membrane protein (DUF1819) {ECO:0000313|EMBL:CBL13240.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_000G1_scaffold_742_12
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7412..7990
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) RepID=A5UP27_METS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ87955.1}; TaxID=420247 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
L1_007_000G1_scaffold_742_13
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

8003..11545
DNA (3543bp) protein (1181aa)
Putative uncharacterized protein id=1924718 bin=GWD2_Clostridiales_32_19 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
hypothetical protein
Tax=GWD2_Clostridiales_32_19_curated
L1_007_000G1_scaffold_742_14
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

11560..15138
DNA (3579bp) protein (1193aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI0003603C2F
type II restriction enzyme, methylase subunit
Tax=GWD2_Clostridiales_32_19_curated
L1_007_000G1_scaffold_742_15
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15164..15706
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MMT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW24672.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
L1_007_000G1_scaffold_742_16
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

15720..18215
DNA (2496bp) protein (832aa)
Putative uncharacterized protein id=1924659 bin=GWD2_Clostridiales_32_19 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
hypothetical protein
Tax=GWD2_Clostridiales_32_19_curated
L1_007_000G1_scaffold_742_17
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18231..20270
DNA (2040bp) protein (680aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V4Y3_CLOSS
ATP-dependent protease La {ECO:0000313|EMBL:KFI70330.1}; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
hypothetical protein
L1_007_000G1_scaffold_742_18
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

20272..22452
DNA (2181bp) protein (727aa)
AAA domain protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R120_9FIRM
AAA domain protein {ECO:0000313|EMBL:CCZ28286.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
cation transport ATPase
L1_007_000G1_scaffold_742_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(22781..23977)
DNA (1197bp) protein (399aa)
Transposase, Mutator family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C433_9FIRM
Transposase, Mutator family {ECO:0000313|EMBL:EDS74417.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transposase, mutator type
L1_007_000G1_scaffold_742_20
unknown

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comp(24059..24496)
DNA (438bp) protein (146aa)

This feature has no annotations

L1_007_000G1_scaffold_742_21
unknown

Not on your lists

comp(24597..25043)
DNA (447bp) protein (149aa)

This feature has no annotations

L1_007_000G1_scaffold_742_22
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25196..26794)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G774_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06152.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
CHAP domain.
L1_007_000G1_scaffold_742_23
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26791..27177)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G775_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06153.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_24
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27203..27424)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Coprobacillus sp. D6 RepID=UPI0002D9B5D7
Uncharacterized protein {ECO:0000313|EMBL:EFW06155.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27424..28194)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G776_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06154.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28197..30533)
DNA (2337bp) protein (779aa)
TRSE protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G778_9FIRM
TRSE protein {ECO:0000313|EMBL:EFW06156.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30971..31804)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KP34_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08636.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_000G1_scaffold_742_28
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31910..32746)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G781_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06159.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32748..33068)
DNA (321bp) protein (107aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G782_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A {ECO:0000313|EMBL:EFW06160.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L1_007_000G1_scaffold_742_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33070..34854)
DNA (1785bp) protein (595aa)
TraG/TraD family protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G783_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EFW06161.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
TraG/TraD family protein
Displaying items 1-30 of 68 in total

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