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L1_007_000G1_scaffold_1014

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1014_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

225..470
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQ45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB60859.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L1_007_000G1_scaffold_1014_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(467..661)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YUK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15693.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L1_007_000G1_scaffold_1014_3
unknown

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1179..1280
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_4
unknown

Not on your lists

comp(1374..1928)
DNA (555bp) protein (185aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_5
unknown

Not on your lists

2031..2261
DNA (231bp) protein (77aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_6
unknown

Not on your lists

comp(2158..2907)
DNA (750bp) protein (250aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_7
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3030..3254
DNA (225bp) protein (75aa)
Cro/Cl family transcriptional regulator n=1 Tax=Lachnospiraceae bacterium COE1 RepID=UPI0003B407EB
Uncharacterized protein {ECO:0000313|EMBL:CDA69375.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_007_000G1_scaffold_1014_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3145..3420)
DNA (276bp) protein (92aa)
HTH-type transcriptional regulator AnsR family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YL64_9FIRM
HTH-type transcriptional regulator AnsR family protein {ECO:0000313|EMBL:EHM54963.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ansR; transcriptional regulator
L1_007_000G1_scaffold_1014_9
unknown

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3519..3737
DNA (219bp) protein (73aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_10
unknown

Not on your lists

3805..3951
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000378AC9D
L1_007_000G1_scaffold_1014_11
unknown

Not on your lists

3975..4199
DNA (225bp) protein (75aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_12
unknown

Not on your lists

4177..4281
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_13
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

4310..4636
DNA (327bp) protein (109aa)
PF08960 domain protein n=1 Tax=Fusobacterium necrophorum subsp. funduliforme Fnf 1007 RepID=J4VWU7_9FUSO
PF08960 domain protein {ECO:0000313|EMBL:EJU18836.1}; TaxID=1161424 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme Fnf 1007.;"
hypothetical protein
L1_007_000G1_scaffold_1014_14
unknown

Not on your lists

4725..4877
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KLC0_9FIRM
L1_007_000G1_scaffold_1014_15
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

4890..6878
DNA (1989bp) protein (663aa)
Phage-related protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BHE4_9FIRM
Phage-related protein {ECO:0000313|EMBL:CDD64937.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
phage-like protein
L1_007_000G1_scaffold_1014_16
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6932..7165
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KL52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47150.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_007_000G1_scaffold_1014_17
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7178..8215
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31185.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Hypothetical protein
L1_007_000G1_scaffold_1014_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8219..8608
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YHL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ64835.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L1_007_000G1_scaffold_1014_19
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8586..9278
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003769D7C
Putative hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:CDC93658.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
metallo-beta-lactamase
L1_007_000G1_scaffold_1014_20
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9379..9798
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VH96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93654.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L1_007_000G1_scaffold_1014_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9812..10540
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YXA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12412.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_007_000G1_scaffold_1014_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10590..11018
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=5 Tax=Clostridiales RepID=A5KQP9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
single-strand binding protein
L1_007_000G1_scaffold_1014_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11034..11426
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035E1535
Uncharacterized protein {ECO:0000313|EMBL:EFC97224.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_000G1_scaffold_1014_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11401..11997
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YVW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12414.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_007_000G1_scaffold_1014_25
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11999..12922
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JAV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT29447.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
bacteriophage-like protein
L1_007_000G1_scaffold_1014_26
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12916..14937
DNA (2022bp) protein (674aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0DQN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62327.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L1_007_000G1_scaffold_1014_27
unknown

Not on your lists

14948..15217
DNA (270bp) protein (90aa)

This feature has no annotations

L1_007_000G1_scaffold_1014_28
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15204..15557
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31166.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L1_007_000G1_scaffold_1014_29
Clostridium sp. CAG:533, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15799..16323
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000370F36E
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262818 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:533.;"
RNA polymerase, sigma 28 subunit, sigk
L1_007_000G1_scaffold_1014_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16356..16616
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6RIZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA91802.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Displaying items 1-30 of 73 in total

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