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L1_007_000G1_scaffold_1279

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1279_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..345
DNA (345bp) protein (115aa)
Repeat protein (Fragment) n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUP6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02787.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_007_000G1_scaffold_1279_2
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1233..1469
DNA (237bp) protein (79aa)
Glutaredoxin n=3 Tax=Bifidobacterium RepID=B6XSF3_9BIFI
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:EEB22517.1}; Putative glutaredoxin {ECO:0000313|EMBL:BAR01063.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L1_007_000G1_scaffold_1279_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1630..2901)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2N1_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29121.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L1_007_000G1_scaffold_1279_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3274..6021
DNA (2748bp) protein (916aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVS1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16228.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L1_007_000G1_scaffold_1279_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6018..8210
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6D1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16229.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
phage infection protein
L1_007_000G1_scaffold_1279_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8207..8860
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2N6_9BIFI
TetR family transcriptional regulator {ECO:0000313|EMBL:KEF29124.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
TetR family transcriptional regulator
L1_007_000G1_scaffold_1279_7
unknown

Not on your lists

8905..9021
DNA (117bp) protein (39aa)

This feature has no annotations

L1_007_000G1_scaffold_1279_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9000..9557)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVS6_9BIFI
FMN-binding protein {ECO:0000313|EMBL:KEF29125.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
FMN-binding protein
L1_007_000G1_scaffold_1279_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9614..10435)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCF6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16236.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter ATP-binding protein
L1_007_000G1_scaffold_1279_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10438..11697)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16238.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter permease
L1_007_000G1_scaffold_1279_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11784..13139)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCF9_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEF29128.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter permease
L1_007_000G1_scaffold_1279_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13156..14427)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2P3_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29129.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L1_007_000G1_scaffold_1279_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14773..15435)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT4_9BIFI
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF29130.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L1_007_000G1_scaffold_1279_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15525..17288)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6E8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16244.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
iron permease
L1_007_000G1_scaffold_1279_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17681..19195)
DNA (1515bp) protein (505aa)
Transporter major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NYI9_9BIFI
Transporter major facilitator family protein {ECO:0000313|EMBL:CDC16245.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
symporter
L1_007_000G1_scaffold_1279_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19215..20210
DNA (996bp) protein (332aa)
ApbE family thiamine biosynthesis lipoprotein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2P6_9BIFI
ApbE family thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:CDC16247.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_000G1_scaffold_1279_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20292..22109)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16248.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter
L1_007_000G1_scaffold_1279_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22126..24093)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NYJ2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16250.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
mdlB2; mdlb2
L1_007_000G1_scaffold_1279_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24399..24893)
DNA (495bp) protein (165aa)
MarR-type transcriptional regulator n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCH0_9BIFI
MarR-type transcriptional regulator {ECO:0000313|EMBL:CDC16251.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
MarR family transcriptional regulator
L1_007_000G1_scaffold_1279_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25011..26063)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVU2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16253.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
aldo/keto reductase family oxidoreductase
L1_007_000G1_scaffold_1279_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26624..26818
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R6NYJ6_9BIFI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:KEF29137.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
thiamine biosynthesis protein ThiS
L1_007_000G1_scaffold_1279_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26962..27675
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2Q5_9BIFI
thiamine biosynthesis protein ThiF
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AIZ13748.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_000G1_scaffold_1279_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27765..28679
DNA (915bp) protein (305aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Thiazole synthase n=3 Tax=Bifidobacterium RepID=B6XSC4_9BIFI
thiG; thiazole synthase
L1_007_000G1_scaffold_1279_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28806..30353)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6G0_9BIFI
Amino acid transporter {ECO:0000313|EMBL:KEF29140.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
amino acid transporter
L1_007_000G1_scaffold_1279_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30905..31465)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUL7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70358.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000G1_scaffold_1279_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31745..33265)
DNA (1521bp) protein (507aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUL5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29142.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
fimbrial subunit FimA
L1_007_000G1_scaffold_1279_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33415..35841)
DNA (2427bp) protein (809aa)
Pilin isopeptide linkage domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUL4_9BIFI
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EEG70354.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000G1_scaffold_1279_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36093..37157)
DNA (1065bp) protein (355aa)
Sortase family protein n=2 Tax=Bifidobacterium RepID=C0BUL2_9BIFI
Putative sortase {ECO:0000313|EMBL:BAR02762.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sortase family protein
L1_007_000G1_scaffold_1279_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37232..37693)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUL1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29144.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L1_007_000G1_scaffold_1279_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37989..39455
DNA (1467bp) protein (489aa)
Transporter, CPA2 family n=3 Tax=root RepID=C0BUK9_9BIFI
Putative sodium-hydrogen antiporter {ECO:0000313|EMBL:BAR02760.1}; Transporter, CPA2 family {ECO:0000313|EMBL:EEG70350.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sodium:proton exchanger
Displaying items 1-30 of 49 in total

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