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L1_007_000G1_scaffold_1296

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1296_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75..1367
DNA (1293bp) protein (431aa)
UPI0003D5B94F related cluster n=1 Tax=unknown RepID=UPI0003D5B94F
Uncharacterized protein {ECO:0000313|EMBL:ETI82516.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
xylulokinase
L1_007_000G1_scaffold_1296_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1595..2506)
DNA (912bp) protein (304aa)
UPI0003D601BF related cluster n=1 Tax=unknown RepID=UPI0003D601BF
Uncharacterized protein {ECO:0000313|EMBL:ETI82515.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2466..3041)
DNA (576bp) protein (192aa)
UPI0003D66F04 related cluster n=1 Tax=unknown RepID=UPI0003D66F04
Uncharacterized protein {ECO:0000313|EMBL:ETI82514.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3197..4243
DNA (1047bp) protein (349aa)
adhC; alcohol dehydrogenase (EC:1.1.1.2)
UPI0003D59206 related cluster n=1 Tax=unknown RepID=UPI0003D59206
Uncharacterized protein {ECO:0000313|EMBL:ETI82513.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4631..5533)
DNA (903bp) protein (301aa)
rbsK; ribokinase (EC:2.7.1.15)
UPI0003D5CD6C related cluster n=1 Tax=unknown RepID=UPI0003D5CD6C
Uncharacterized protein {ECO:0000313|EMBL:ETI82512.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5536..5850)
DNA (315bp) protein (105aa)
UPI0003D5EAB7 related cluster n=1 Tax=unknown RepID=UPI0003D5EAB7
Uncharacterized protein {ECO:0000313|EMBL:ETI82511.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5875..6558)
DNA (684bp) protein (228aa)
UPI0003D5EAB7 related cluster n=1 Tax=unknown RepID=UPI0003D5EAB7
Uncharacterized protein {ECO:0000313|EMBL:ETI82511.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_8
Mobiluncus mulieris, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6558..7958)
DNA (1401bp) protein (467aa)
sugar:proton symporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B4A14A
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EEZ90538.1}; TaxID=596328 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris 28-1.;"
fucP; L-fucose:H+ symporter permease
L1_007_000G1_scaffold_1296_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7955..8608)
DNA (654bp) protein (218aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
UPI0003D65293 related cluster n=1 Tax=unknown RepID=UPI0003D65293
L1_007_000G1_scaffold_1296_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8721..9698)
DNA (978bp) protein (326aa)
UPI0003D66906 related cluster n=1 Tax=unknown RepID=UPI0003D66906
Uncharacterized protein {ECO:0000313|EMBL:ETI82508.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sugar-binding domain-containing protein
L1_007_000G1_scaffold_1296_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10528..11571
DNA (1044bp) protein (348aa)
UPI0003D5FA1E related cluster n=1 Tax=unknown RepID=UPI0003D5FA1E
Uncharacterized protein {ECO:0000313|EMBL:ETI82506.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
zinc-binding dehydrogenase
L1_007_000G1_scaffold_1296_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11722..12711
DNA (990bp) protein (330aa)
UPI0003D643AD related cluster n=1 Tax=unknown RepID=UPI0003D643AD
PSE family sulfate exporter {ECO:0000313|EMBL:ETI82505.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12700..12870)
DNA (171bp) protein (57aa)
UPI0003D5FAE3 related cluster n=1 Tax=unknown RepID=UPI0003D5FAE3
Uncharacterized protein {ECO:0000313|EMBL:ETI82504.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13473..13856
DNA (384bp) protein (128aa)
UPI0003D64516 related cluster n=1 Tax=unknown RepID=UPI0003D64516
Death on curing protein {ECO:0000313|EMBL:ETI82503.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
death-on-curing family protein
L1_007_000G1_scaffold_1296_15
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14465..15211)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VU88_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30351.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
L1_007_000G1_scaffold_1296_16
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15195..15890)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VW48_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30350.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
transporter
L1_007_000G1_scaffold_1296_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16243..16560
DNA (318bp) protein (106aa)
UPI0003D68C76 related cluster n=1 Tax=unknown RepID=UPI0003D68C76
Uncharacterized protein {ECO:0000313|EMBL:ETI82501.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16660..17268
DNA (609bp) protein (203aa)
UPI0003D5CC9F related cluster n=1 Tax=unknown RepID=UPI0003D5CC9F
Transcriptional regulator {ECO:0000313|EMBL:ETI82500.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcriptional regulator, TetR family
L1_007_000G1_scaffold_1296_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17299..18306
DNA (1008bp) protein (336aa)
UPI0003D631B0 related cluster n=1 Tax=unknown RepID=UPI0003D631B0
Uncharacterized protein {ECO:0000313|EMBL:ETI82499.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18474..18809)
DNA (336bp) protein (112aa)
lipA; lipoyl synthase (EC:2.8.1.8)
UPI0003D674E6 related cluster n=1 Tax=unknown RepID=UPI0003D674E6
Lipoyl synthase {ECO:0000313|EMBL:ETI82498.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18873..19325
DNA (453bp) protein (151aa)
UPI0003D62713 related cluster n=1 Tax=unknown RepID=UPI0003D62713
Uncharacterized protein {ECO:0000313|EMBL:ETI82497.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19428..20072)
DNA (645bp) protein (215aa)
putative phosphoglycerate mutase (EC:5.4.2.1)
UPI0003D5A747 related cluster n=1 Tax=unknown RepID=UPI0003D5A747
Uncharacterized protein {ECO:0000313|EMBL:ETI82496.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_1296_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20080..20523)
DNA (444bp) protein (148aa)
UPI0003D68542 related cluster n=1 Tax=unknown RepID=UPI0003D68542
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_1296_24
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

comp(20533..22950)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3B890
Putative uncharacterized protein {ECO:0000313|EMBL:CBZ30587.1}; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana (strain MHOM/GT/2001/U1103).;"
hypothetical protein
L1_007_000G1_scaffold_1296_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22950..23567)
DNA (618bp) protein (206aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5F4E3 related cluster n=1 Tax=unknown RepID=UPI0003D5F4E3
nicotinate-nucleotide adenylyltransferase
L1_007_000G1_scaffold_1296_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23711..25231)
DNA (1521bp) protein (507aa)
UPI0003D69B1E related cluster n=1 Tax=unknown RepID=UPI0003D69B1E
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GTP-binding protein Obg/CgtA
L1_007_000G1_scaffold_1296_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25346..25597)
DNA (252bp) protein (84aa)
UPI0003D59E93 related cluster n=1 Tax=unknown RepID=UPI0003D59E93
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpmA; 50S ribosomal protein L27
L1_007_000G1_scaffold_1296_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25622..25960)
DNA (339bp) protein (113aa)
UPI0003D67603 related cluster n=1 Tax=unknown RepID=UPI0003D67603
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ribosomal protein L21
L1_007_000G1_scaffold_1296_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26344..27258)
DNA (915bp) protein (305aa)
UPI0003D5B875 related cluster n=1 Tax=unknown RepID=UPI0003D5B875
Uncharacterized protein {ECO:0000313|EMBL:ETI82489.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glutathione synthetase
L1_007_000G1_scaffold_1296_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27325..28452)
DNA (1128bp) protein (376aa)
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Varibaculum cambriense RepID=UPI0003B6517A
Uncharacterized protein {ECO:0000313|EMBL:ETI82488.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 37 in total

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