ggKbase home page

L1_007_000G1_scaffold_1333

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1333_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1212)
DNA (1212bp) protein (404aa)
60 kDa chaperonin n=8 Tax=Bifidobacterium breve RepID=F6C7W8_BIFBA
60 kDa chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1333_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1450..1689)
DNA (240bp) protein (80aa)
Cold shock protein n=6 Tax=Bifidobacterium breve RepID=F9Y276_BIFBU
Cold shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEF27793.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1333_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1913..2569)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRF3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88798.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L1_007_000G1_scaffold_1333_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2686..3375
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Uracil-DNA glycosylase n=3 Tax=Bifidobacterium breve RepID=F6C7W5_BIFBA
Uracil-DNA glycosylase
L1_007_000G1_scaffold_1333_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3414..4493
DNA (1080bp) protein (360aa)
ATPase family associated with various cellular activities (AAA) n=2 Tax=Bifidobacterium breve RepID=F6C7W4_BIFBA
moxR2; MoxR protein
MoxR protein {ECO:0000313|EMBL:ABE96041.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1333_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4490..5434
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C7W3_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27815.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1333_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5431..5973
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C7W2_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21537.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1333_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5973..7028
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVJ8_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19741.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7025..8062
DNA (1038bp) protein (346aa)
von Willebrand factor type A domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7W0_BIFBA
putative membrane spanning protein with a von Willebrand factor type A domain
Putative membrane spanning protein with a von Willebrand factor type A domain {ECO:0000313|EMBL:AHJ21539.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1333_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8059..8631
DNA (573bp) protein (191aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2G4_BIFBU
Conserved hypothetical secreted protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE96046.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1333_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9063..10643
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L238_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88789.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_1333_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10670..11314)
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7V7_BIFBA
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD75712.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1333_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11447..12883
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase n=4 Tax=Bifidobacterium breve RepID=S2ZG75_BIFBR
Adenylosuccinate lyase
Adenylosuccinate lyase {ECO:0000313|EMBL:AHJ19746.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12956..15520
DNA (2565bp) protein (855aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI0002DA67CD
Hypothetical membrane spanning protein in uncharacterized protein UPF0104 family
Hypothetical membrane spanning protein in uncharacterized protein UPF0104 family {ECO:0000313|EMBL:AHJ19747.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15658..15939
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=6 Tax=Bifidobacterium breve RepID=F6C7V4_BIFBA
DNA-binding protein HU
DNA-binding protein HB1 {ECO:0000313|EMBL:ERI88092.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_000G1_scaffold_1333_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16050..17537)
DNA (1488bp) protein (496aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Pup--protein ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVK9_BIFBR
Hypothetical protein with DUF275 domain
L1_007_000G1_scaffold_1333_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17537..17734)
DNA (198bp) protein (66aa)
Ubiquitin-like protein Pup n=6 Tax=Bifidobacterium breve RepID=F6C7V2_BIFBA
Hypothetical protein with DUF797 domain
Ubiquitin-like protein Pup {ECO:0000313|EMBL:AEF26371.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1333_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17844..18746)
DNA (903bp) protein (301aa)
Inositol monophosphatase family protein n=6 Tax=Bifidobacterium breve RepID=F9Y2H3_BIFBU
Inositol monophosphatase family protein
Inositol monophosphatase family protein {ECO:0000313|EMBL:AHJ21547.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1333_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18752..20425)
DNA (1674bp) protein (558aa)
Proteasome accessory factor PafA2 {ECO:0000313|EMBL:EFE88781.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFE88781.1};; Uncharacterized protein {ECO:0000313|EMBL:BAR00478.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Proteasome accessory factor PafA2 n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRD6_BIFBR
Hypothetical protein with DUF275 domain
L1_007_000G1_scaffold_1333_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20528..21244)
DNA (717bp) protein (239aa)
Putative ribulose-phosphate 3-epimerase n=2 Tax=Bifidobacterium breve RepID=F6C7U9_BIFBA
Ribulose-phosphate 3-epimerase
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:AHJ21549.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1333_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21422..22540)
DNA (1119bp) protein (373aa)
PTS system, fructose-like enzyme IIC component {ECO:0000313|EMBL:ABE96058.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ABE96058.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
PTS system, fructose-like enzyme IIC component n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2H6_BIFBU
PTS system, fructose-like enzyme IIC component
L1_007_000G1_scaffold_1333_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22592..22903)
DNA (312bp) protein (104aa)
PTS system, fructose-like IIB component n=2 Tax=Bifidobacterium breve RepID=F9Y2H7_BIFBU
PTS system, fructose-like IIB component
PTS system, fructose-like IIB component {ECO:0000313|EMBL:AHJ19754.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22954..23424)
DNA (471bp) protein (157aa)
PTS system, fructose subfamily, IIA component n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG84_BIFBR
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:EPD75723.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
PTS system, fructose-like IIA component
L1_007_000G1_scaffold_1333_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23468..23896)
DNA (429bp) protein (143aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Bifidobacterium breve RepID=F6C7U6_BIFBA
Nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein
Nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein {ECO:0000313|EMBL:AHJ19756.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23893..25386)
DNA (1494bp) protein (498aa)
PRD domain protein n=2 Tax=Bifidobacterium breve RepID=F6C7U5_BIFBA
Transcription antiterminator, BglG family
Transcription antiterminator, BglG family {ECO:0000313|EMBL:AHJ19757.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1333_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25630..26343
DNA (714bp) protein (238aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bifidobacterium breve RepID=F6C7U4_BIFBA
Haloacid dehalogenase-like hydrolase (HAD superfamily)
Haloacid dehalogenase-like hydrolase (HAD superfamily) {ECO:0000313|EMBL:AHJ21555.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1333_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26403..27977)
DNA (1575bp) protein (525aa)
Proteasome ATPase n=2 Tax=Bifidobacterium breve RepID=F6C7U3_BIFBA
AAA family ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1333_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28031..28726)
DNA (696bp) protein (232aa)
Membrane protein DedA family protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L228_BIFBR
DedA family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75728.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1333_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28777..29499
DNA (723bp) protein (241aa)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:AEF27185.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AEF27185.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphoserine phosphatase SerB n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L227_BIFBR
Phosphoserine phosphatase
L1_007_000G1_scaffold_1333_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29547..31856
DNA (2310bp) protein (770aa)
Primosomal protein N n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7U0_BIFBA
Primosomal protein N {ECO:0000313|EMBL:AEF26337.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
primosomal protein N'
Displaying items 1-30 of 33 in total

View Taxonomy