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L1_007_000G1_scaffold_1366

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1366_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12..308)
DNA (297bp) protein (99aa)
Outer membrane protein YejO n=1 Tax=Escherichia coli KTE100 RepID=S1GTK1_ECOLX
Outer membrane protein YejO {ECO:0000313|EMBL:EOW06535.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
yejO; autotransporter IS5K-containing
L1_007_000G1_scaffold_1366_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628..1275
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator (Sensor NarQ) n=732 Tax=Enterobacteriaceae RepID=J7QTA7_ECOLX
transcriptional regulator NarP
Nitrate/nitrite response regulator protein {ECO:0000313|EMBL:EFW52214.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L1_007_000G1_scaffold_1366_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1310..2362)
DNA (1053bp) protein (351aa)
Cytochrome c-type biogenesis family protein n=51 Tax=Escherichia coli RepID=A8A256_ECOHS
ccmH; heme lyase, CcmH subunit
Cytochrome c-type biogenesis protein CcmH {ECO:0000313|EMBL:ENG96736.1}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.3.;"
L1_007_000G1_scaffold_1366_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2359..2916)
DNA (558bp) protein (186aa)
Thiol:disulfide interchange protein DsbE n=1308 Tax=Enterobacteriaceae RepID=DSBE_ECO57
dsbE; thiol:disulfide interchange protein DsbE
Disulfide interchange protein DsbE {ECO:0000313|EMBL:KDZ19493.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L1_007_000G1_scaffold_1366_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2913..4856)
DNA (1944bp) protein (648aa)
Cytochrome c-type biogenesis protein CcmF n=294 Tax=Enterobacteriaceae RepID=CCMF_ECOLI
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:KDZ41711.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
heme lyase, CcmF subunit
L1_007_000G1_scaffold_1366_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4853..5332)
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1370 Tax=Enterobacteriaceae RepID=CCME_ECO24
ccmE; periplasmic heme chaperone
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L1_007_000G1_scaffold_1366_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5329..5538)
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
ccmD; heme exporter protein CcmD
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L1_007_000G1_scaffold_1366_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5535..6272)
DNA (738bp) protein (246aa)
Heme exporter protein C n=1371 Tax=Enterobacteriaceae RepID=CCMC_ECO57
ccmC; heme exporter protein CcmC
CcmC {ECO:0000313|EMBL:EHU54851.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L1_007_000G1_scaffold_1366_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6314..6976)
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L1_007_000G1_scaffold_1366_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6973..7590)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
Cytochrome C biogenesis protein CcmA n=1 Tax=Escherichia coli LAU-EC7 RepID=V8LCL2_ECOLX
heme exporter protein CcmA
L1_007_000G1_scaffold_1366_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7609..8211)
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57
napC; cytochrome c-type protein NapC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
L1_007_000G1_scaffold_1366_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8221..8670)
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=585 Tax=Enterobacteriaceae RepID=J7QTB6_ECOLX
napB; citrate reductase cytochrome C subunit
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L1_007_000G1_scaffold_1366_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8667..9530)
DNA (864bp) protein (288aa)
Ferredoxin-type protein NapH n=490 Tax=cellular organisms RepID=NAPH_ECOLI
napH; quinol dehydrogenase membrane component
Ferredoxin-type , NapH/MauN family protein {ECO:0000313|EMBL:EMX31029.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L1_007_000G1_scaffold_1366_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9517..10212)
DNA (696bp) protein (232aa)
Ferredoxin-type protein NapG n=1096 Tax=Enterobacteriaceae RepID=NAPG_ECOL6
methylamine utilization ferredoxin-type protein MauM
Ferredoxin {ECO:0000313|EMBL:EQQ07859.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L1_007_000G1_scaffold_1366_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10219..12705)
DNA (2487bp) protein (829aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
Periplasmic nitrate reductase n=448 Tax=Enterobacteriaceae RepID=NAPA_ECOHS
napA; nitrate reductase catalytic subunit
L1_007_000G1_scaffold_1366_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12702..12965)
DNA (264bp) protein (88aa)
napD; assembly protein for periplasmic nitrate reductase (EC:1.7.99.4)
Protein NapD n=1009 Tax=Enterobacteriaceae RepID=NAPD_ECO57
NapD family protein {ECO:0000313|EMBL:EMX86614.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L1_007_000G1_scaffold_1366_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12955..13449)
DNA (495bp) protein (165aa)
Ferredoxin-type protein NapF n=966 Tax=Enterobacteriaceae RepID=NAPF_ECO57
napF; ferredoxin-type protein
Ferredoxin-type protein NapF {ECO:0000313|EMBL:KEJ46490.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L1_007_000G1_scaffold_1366_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13558..13722
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE100 RepID=S1GU63_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW06552.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L1_007_000G1_scaffold_1366_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13857..14345
DNA (489bp) protein (163aa)
Ecotin n=221 Tax=Escherichia RepID=ECOT_ECO8A
ecotin (serine protease inhibitor)
Ecotin {ECO:0000256|HAMAP-Rule:MF_00706, ECO:0000256|SAAS:SAAS00013245}; Flags: Precursor;; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L1_007_000G1_scaffold_1366_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14711..16357)
DNA (1647bp) protein (549aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
mqo; malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase n=78 Tax=Escherichia coli RepID=MQO_ECOLC
L1_007_000G1_scaffold_1366_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16575..18218)
DNA (1644bp) protein (548aa)
Lipid A export ATP-binding/permease protein msbA n=15 Tax=Escherichia coli RepID=K3JLE7_ECOLX
ABC transporter ATP-binding protein YojI {ECO:0000313|EMBL:ENG96754.1}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.3.;"
ABC transporter ATP-binding protein
L1_007_000G1_scaffold_1366_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18294..18944)
DNA (651bp) protein (217aa)
Alkylated DNA repair protein AlkB n=81 Tax=Escherichia coli RepID=D7XL29_ECOLX
Alkylated DNA repair protein AlkB {ECO:0000313|EMBL:EMX86620.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
alkB; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions
L1_007_000G1_scaffold_1366_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18944..20008)
DNA (1065bp) protein (355aa)
Bifunctional transcriptional activator/DNA repair enzyme Ada {ECO:0000313|EMBL:ENA31239.1}; EC=2.1.1.63 {ECO:0000313|EMBL:ENA31239.1};; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
Bifunctional transcriptional activator/DNA repair enzyme Ada n=158 Tax=Escherichia RepID=ADA_ECOLI
ada; fused DNA-binding transcriptional dual regulator / O6-methylguanine-DNA methyltransferase
L1_007_000G1_scaffold_1366_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20082..21137)
DNA (1056bp) protein (352aa)
Thiamine biosynthesis lipoprotein ApbE n=2 Tax=Escherichia coli RepID=K3INV9_ECOLX
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EOW06129.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
thiamine biosynthesis lipoprotein ApbE
L1_007_000G1_scaffold_1366_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21249..22355)
DNA (1107bp) protein (369aa)
Outer membrane protein 1b n=3 Tax=Escherichia coli RepID=K3JIS1_ECOLX
Membrane protein {ECO:0000313|EMBL:KDV30384.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
outer membrane porin protein C
L1_007_000G1_scaffold_1366_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23094..25766
DNA (2673bp) protein (891aa)
Phosphotransferase RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; EC=2.7.2.- {ECO:0000256|HAMAP-Rule:MF_00980};; Phosphotransfer intermediate RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
Hpt sensor signal transduction histidine kinase n=27 Tax=Escherichia coli RepID=B1IY56_ECOLC
phosphotransfer intermediate protein in two-component regulatory system with RcsBC
L1_007_000G1_scaffold_1366_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25783..26433
DNA (651bp) protein (217aa)
Transcriptional regulatory protein RcsB n=1388 Tax=Enterobacteriaceae RepID=RCSB_ECOLX
rcsB; DNA-binding response regulator in two-component regulatory system with RcsC and RcsD
Transcriptional regulatory protein RcsB {ECO:0000256|HAMAP-Rule:MF_00981}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L1_007_000G1_scaffold_1366_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26633..29482)
DNA (2850bp) protein (950aa)
hybrid sensory kinase in two-component regulatory system with RcsB and YojN (EC:2.7.13.3)
Sensor histidine kinase RcsC {ECO:0000256|HAMAP-Rule:MF_00979}; EC=2.7.13.3 {ECO:0000256|HAMAP-Rule:MF_00979};; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
Sensor histidine kinase/response regulator RcsC n=19 Tax=Escherichia coli RepID=A8A283_ECOHS
L1_007_000G1_scaffold_1366_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29649..31475
DNA (1827bp) protein (609aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
Signal transduction histidine-protein kinase AtoS n=142 Tax=Bacteria RepID=ATOS_ECOLI
atoS; sensory histidine kinase AtoS
L1_007_000G1_scaffold_1366_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31472..32857
DNA (1386bp) protein (462aa)
Acetoacetate metabolism regulatory protein AtoC n=1 Tax=Escherichia coli KTE100 RepID=S1GSH8_ECOLX
Acetoacetate metabolism regulatory protein AtoC {ECO:0000313|EMBL:EOW06135.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
acetoacetate metabolism regulatory protein AtoC
Displaying items 1-30 of 76 in total

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