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L1_007_000G1_scaffold_1396

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1396_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XR29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11271.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_007_000G1_scaffold_1396_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(638..1264)
DNA (627bp) protein (209aa)
Transcriptional regulator GntR family n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5X8X6_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA11270.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
GntR family transcriptional regulator
L1_007_000G1_scaffold_1396_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1611..2522
DNA (912bp) protein (304aa)
UPI0003D658C0 related cluster n=1 Tax=unknown RepID=UPI0003D658C0
Uncharacterized protein {ECO:0000313|EMBL:ETI93075.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
putative membrane protein
L1_007_000G1_scaffold_1396_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2600..3871
DNA (1272bp) protein (424aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAE6_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDQ96334.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
oxidoreductase
L1_007_000G1_scaffold_1396_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4235..4888
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11267.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_000G1_scaffold_1396_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5011..5649)
DNA (639bp) protein (213aa)
isochorismatase (EC:3.-.-.-)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11266.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L1_007_000G1_scaffold_1396_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5763..6500)
DNA (738bp) protein (246aa)
glpQ; glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAE3_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EDQ96331.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_000G1_scaffold_1396_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6553..8475)
DNA (1923bp) protein (641aa)
UPI0003D690C7 related cluster n=1 Tax=unknown RepID=UPI0003D690C7
Uncharacterized protein {ECO:0000313|EMBL:ETI93070.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter ATP-binding protein
L1_007_000G1_scaffold_1396_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8745..9590
DNA (846bp) protein (282aa)
AP endonuclease, family 2 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAE1_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EDQ96329.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
xylose isomerase domain-containing protein TIM barrel
L1_007_000G1_scaffold_1396_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9603..10706
DNA (1104bp) protein (368aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alan ineligase (UDP-MurNAc-pentapeptide synthetase)(D-alanyl-D-alanine-adding enzyme) (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3K4_9CLOT
L1_007_000G1_scaffold_1396_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10666..10935
DNA (270bp) protein (90aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3K4_9CLOT
L1_007_000G1_scaffold_1396_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11073..12533)
DNA (1461bp) protein (487aa)
Transcriptional regulator GntR family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XR17_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA11261.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
GntR family transcriptional regulator
L1_007_000G1_scaffold_1396_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12676..12837)
DNA (162bp) protein (54aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X8W5_9CLOT
L1_007_000G1_scaffold_1396_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12831..13553)
DNA (723bp) protein (241aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
D-alanine--D-alanine ligase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAD6_9FIRM
ddl; D-alanine--D-alanine ligase
L1_007_000G1_scaffold_1396_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13637..13831
DNA (195bp) protein (65aa)
UPI0003D5D1A0 related cluster n=1 Tax=unknown RepID=UPI0003D5D1A0
Uncharacterized protein {ECO:0000313|EMBL:ETI93065.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_007_000G1_scaffold_1396_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13955..14065
DNA (111bp) protein (37aa)
UPI0003D6395B related cluster n=1 Tax=unknown RepID=UPI0003D6395B
Uncharacterized protein {ECO:0000313|EMBL:ETI93064.1}; Flags: Fragment;; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L1_007_000G1_scaffold_1396_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14260..15186
DNA (927bp) protein (309aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAD5_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
competence damage-inducible protein A
L1_007_000G1_scaffold_1396_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15324..15764
DNA (441bp) protein (147aa)
LytTr DNA-binding domain protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAD2_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDQ96320.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
response regulator receiver protein
L1_007_000G1_scaffold_1396_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15777..16046
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96319.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_000G1_scaffold_1396_20

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16262..17182
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ36018.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
multidrug ABC transporter ATPase
L1_007_000G1_scaffold_1396_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17183..18028
DNA (846bp) protein (282aa)
ABC-2 type transporter n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAC9_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EDQ96317.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_000G1_scaffold_1396_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18085..18672)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0AAC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11255.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_000G1_scaffold_1396_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18809..19375
DNA (567bp) protein (189aa)
DJ-1 family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XFR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI93471.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
DJ-1 family protein
L1_007_000G1_scaffold_1396_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19509..20453
DNA (945bp) protein (315aa)
UPI0003D664D2 related cluster n=1 Tax=unknown RepID=UPI0003D664D2
Uncharacterized protein {ECO:0000313|EMBL:ETI93470.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L1_007_000G1_scaffold_1396_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20553..21497)
DNA (945bp) protein (315aa)
Radical SAM protein, TIGR01212 family n=2 Tax=Clostridiales RepID=B0AAC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93469.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
radical SAM protein
L1_007_000G1_scaffold_1396_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21898..22545
DNA (648bp) protein (216aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
tal1; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XR11_9CLOT
L1_007_000G1_scaffold_1396_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22660..24642
DNA (1983bp) protein (661aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
tkt1; transketolase Tkt (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAC3_9FIRM
L1_007_000G1_scaffold_1396_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25169..26875)
DNA (1707bp) protein (569aa)
Nitrogen regulatory protein P-II n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAC2_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EDQ96310.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ammonium transporter
L1_007_000G1_scaffold_1396_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26975..29065)
DNA (2091bp) protein (697aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDQ96309.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDQ96309.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
glnA3-2; Type-3 glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAC1_9FIRM
L1_007_000G1_scaffold_1396_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29548..30867
DNA (1320bp) protein (440aa)
Glutamine synthetase beta-grasp domain protein n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3J1_9CLOT
Glutamine synthetase beta-grasp domain protein {ECO:0000313|EMBL:CDA11247.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glutamine synthetase, type I
Displaying items 1-30 of 77 in total

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