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L1_007_000G1_scaffold_1708

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1708_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..483)
DNA (483bp) protein (161aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XZ26_BIFBU
ATP-binding protein of ABC transporter system
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY31951.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L1_007_000G1_scaffold_1708_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(677..1519)
DNA (843bp) protein (281aa)
HAD ATPase, P-type, family IC n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEU6_BIFBR
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EPD74744.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative calcium-transporting ATPase
L1_007_000G1_scaffold_1708_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1567..2913
DNA (1347bp) protein (449aa)
Histidine kinase n=3 Tax=Bifidobacterium breve RepID=F6C9U8_BIFBA
Histidine kinase sensor of two-component system
Histidine kinase sensor of two-component system {ECO:0000313|EMBL:AHJ19120.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1708_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2910..3563
DNA (654bp) protein (218aa)
Response regulator receiver domain protein n=3 Tax=Bifidobacterium breve RepID=F6C9U9_BIFBA
Response regulator of two-component system
Response regulator receiver domain protein {ECO:0000313|EMBL:AEF27473.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1708_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3590..4213)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C9V0_BIFBA
Hypothetical protein with DUF47 domain
Uncharacterized protein {ECO:0000313|EMBL:AHJ19118.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1708_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4231..5295)
DNA (1065bp) protein (355aa)
Low-affinity inorganic phosphate transporter n=2 Tax=Bifidobacterium breve RepID=F9XZ22_BIFBU
Low-affinity inorganic phosphate transporter
Uncharacterized protein {ECO:0000313|EMBL:EPD74739.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1708_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5534..6829
DNA (1296bp) protein (432aa)
Cyclomaltodextrinase (EC:3.2.1.54)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDE4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74738.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1708_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6961..8988)
DNA (2028bp) protein (676aa)
DEAD/DEAH box helicase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9V3_BIFBA
putative cold-shock DEAD-box protein A
DEAD/DEAH box helicase {ECO:0000313|EMBL:AEF27947.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1708_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9361..10650)
DNA (1290bp) protein (430aa)
Putative permease n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BP38_BIFBR
Uracil/xanthine permease
Uracil/xanthine permease {ECO:0000313|EMBL:AHJ21034.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1708_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10756..11586)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=Q8G5U1_BIFLO
Hypothetical protein in phosphoglycerate mutase family
Uncharacterized protein {ECO:0000313|EMBL:AHJ19113.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1708_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11637..12218)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AEU0_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74734.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1708_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12341..13711)
DNA (1371bp) protein (457aa)
Macrolide-efflux protein, MSF member n=2 Tax=Bifidobacterium breve RepID=F9XZ16_BIFBU
Macrolide-efflux protein, MSF member
Uncharacterized protein {ECO:0000313|EMBL:EPD74733.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1708_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14164..14526
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEC7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74731.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Glyoxalase family protein
L1_007_000G1_scaffold_1708_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14666..15274)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK47_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74730.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1708_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15253..15435)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ13_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95539.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1708_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15442..15603)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CKQ2_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84643.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_000G1_scaffold_1708_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15716..16516)
DNA (801bp) protein (267aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=D4BP30_BIFBR
Conserved hypothetical membrane spanning protein with DUF81 domain
Hypothetical membrane spanning protein with DUF81 domain {ECO:0000313|EMBL:AHJ21027.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1708_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16565..17908)
DNA (1344bp) protein (448aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:EFE89416.1}; EC=1.1.99.- {ECO:0000313|EMBL:EFE89416.1};; Uncharacterized protein {ECO:0000313|EMBL:BAQ99852.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Arylsulfatase regulator (Fe-S oxidoreductase) n=3 Tax=Bifidobacterium breve RepID=F9XZ11_BIFBU
Arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_000G1_scaffold_1708_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18031..19557)
DNA (1527bp) protein (509aa)
Sulfatase family protein n=4 Tax=Bifidobacterium breve RepID=F9XZ10_BIFBU
Sulfatase family protein {ECO:0000313|EMBL:ABE95536.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Sulfatase family protein
L1_007_000G1_scaffold_1708_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19647..21074)
DNA (1428bp) protein (476aa)
Glucose/fructose transport protein n=2 Tax=Bifidobacterium breve RepID=F9XZ09_BIFBU
Glucose/fructose transport protein
Glucose/fructose transport protein {ECO:0000313|EMBL:AHJ21024.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1708_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21327..22166)
DNA (840bp) protein (280aa)
Aldose 1-epimerase family protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZ08_BIFBU
Aldose 1-epimerase family protein
Aldose 1-epimerase family protein {ECO:0000313|EMBL:ABE95534.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1708_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22485..23669
DNA (1185bp) protein (395aa)
ROK family protein n=3 Tax=Bifidobacterium breve RepID=D4BP24_BIFBR
NagC/XylR-type transciptional regulator
ROK family protein {ECO:0000313|EMBL:EFE89412.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_1708_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23725..24699
DNA (975bp) protein (325aa)
Sugar kinase, ROK family n=5 Tax=Bifidobacterium breve RepID=F9XZ06_BIFBU
Sugar kinase, ROK family
Putative glucokinase {ECO:0000313|EMBL:BAQ99846.1}; ROK family protein {ECO:0000313|EMBL:EFE89410.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_1708_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24785..25597
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glucosamine-6-phosphate deaminase n=5 Tax=Bifidobacterium breve RepID=F6C9W0_BIFBA
Glucosamine-6-phosphate isomerase
L1_007_000G1_scaffold_1708_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25691..26935
DNA (1245bp) protein (415aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Bifidobacterium breve RepID=D4BP21_BIFBR
N-acetylglucosamine-6-phosphate deacetylase
L1_007_000G1_scaffold_1708_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27199..27666)
DNA (468bp) protein (156aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphorylase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9W2_BIFBA
Glycogen or amylose phosphorylase
Displaying 26 items

View Taxonomy