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L1_007_000G1_scaffold_1986

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1986_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67..498)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=7 Tax=Bifidobacterium RepID=RL11_BIFLS
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_1986_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1307..2068
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQF8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88453.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L1_007_000G1_scaffold_1986_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2423..3250)
DNA (828bp) protein (276aa)
Transcription termination/antitermination protein NusG n=3 Tax=Bifidobacterium breve RepID=F9XYT6_BIFBU
Transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_1986_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3283..3510)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium breve RepID=F6C822_BIFBA
secE; Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1986_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3840..5045)
DNA (1206bp) protein (402aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C823_BIFBA
aspC; Aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AHJ21925.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1986_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5187..6449
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZH25_BIFBR
Polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:EPD76073.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1986_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6545..7645)
DNA (1101bp) protein (367aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
gamma-glutamyl kinase n=1 Tax=Bifidobacterium breve RepID=UPI00037BEFE5
Glutamate 5-kinase
L1_007_000G1_scaffold_1986_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7785..9476)
DNA (1692bp) protein (564aa)
GTPase Obg n=3 Tax=Bifidobacterium breve RepID=F6C826_BIFBA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
GTP-binding protein, GTP1/OBG family
L1_007_000G1_scaffold_1986_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9543..9794)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=5 Tax=Bifidobacterium breve RepID=F6C827_BIFBA
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_1986_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9817..10125)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=6 Tax=Bifidobacterium breve RepID=F6C828_BIFBA
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1986_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10312..13398)
DNA (3087bp) protein (1029aa)
Rne/Rng family ribonuclease n=2 Tax=Bifidobacterium breve RepID=S2ZH31_BIFBR
Ribonuclease G
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EPD76078.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1986_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13817..15022)
DNA (1206bp) protein (402aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AIA2_BIFBR
Succinyl-diaminopimelate desuccinylase
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EPD76079.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_1986_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15128..16072
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Bifidobacterium breve RepID=F6C831_BIFBA
Transporter
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87059.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_000G1_scaffold_1986_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16148..17041)
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthase n=5 Tax=Bifidobacterium breve RepID=F9XYU7_BIFBU
Dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHJ21934.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1986_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17153..17920)
DNA (768bp) protein (256aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZ91_BIFBR
Hypothetical protein
Amidohydrolase family protein {ECO:0000313|EMBL:ERI87057.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_000G1_scaffold_1986_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17922..19184)
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=5 Tax=Bifidobacterium RepID=D6ZWK1_BIFLJ
transporter, member of MFS, possible L-fucose permease
Transporter, member of MFS, possible L-fucose permease {ECO:0000313|EMBL:AHJ21936.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1986_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19374..20165)
DNA (792bp) protein (264aa)
Short chain dehydrogenase n=7 Tax=Bifidobacterium RepID=F9XYV0_BIFBU
KR domain-containing protein
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFE88435.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_1986_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20306..21589)
DNA (1284bp) protein (428aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=5 Tax=Bifidobacterium breve RepID=F6C836_BIFBA
Mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:AHJ21938.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_1986_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21801..22829
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C837_BIFBA
putative HTH-type transcriptional repressor PurR
Sugar-binding domain protein {ECO:0000313|EMBL:AEF27126.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_1986_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22811..22978)
DNA (168bp) protein (56aa)
Putative efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0W1_BIFBR
Transporter
Transporter {ECO:0000313|EMBL:ABE96412.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying 20 items

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