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L1_007_000G1_scaffold_2089

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_2089_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1379
DNA (1377bp) protein (459aa)
Transcriptional regulator, GntR family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E195_BIFBR
Multiple substrate aminotransferase (MsaT) containing domain and a regulatory domain of the GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI87852.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_000G1_scaffold_2089_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1460..2638
DNA (1179bp) protein (393aa)
Citrate transporter n=3 Tax=Bifidobacterium breve RepID=D4BN12_BIFBR
putative membrane spanning protein, possible citrate transporter
Uncharacterized protein {ECO:0000313|EMBL:EPD76865.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_2089_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2642..2920)
DNA (279bp) protein (93aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C5T1_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:EFE89050.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L1_007_000G1_scaffold_2089_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3156..3614)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBI3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87849.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
alpha-L-arabinofuranosidase A-like protein
L1_007_000G1_scaffold_2089_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3762..4631
DNA (870bp) protein (290aa)
Transcriptional regulator, RpiR family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2F1_BIFBU
Transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABE95251.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_2089_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5049..5234)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BN16_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89053.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_2089_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5495..6826
DNA (1332bp) protein (444aa)
Solute-binding protein of ABC transporter system for sugars n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2F3_BIFBU
Solute-binding protein of ABC transporter system for sugars
Solute-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:AHJ18825.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_2089_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6838..8082
DNA (1245bp) protein (415aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium breve RepID=F9Y2F4_BIFBU
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AHJ18826.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_2089_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8063..9877
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3R8_BIFBR
agl2; Alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:AHJ20734.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_2089_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10082..10285
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJC3_BIFBR
transposase
Transposase {ECO:0000313|EMBL:AHJ20735.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_2089_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10391..12010
DNA (1620bp) protein (540aa)
ABC transporter, substrate-binding protein, family 5 n=4 Tax=Bifidobacterium breve RepID=F6C5J8_BIFBA
Solute-binding protein of ABC transporter system for peptides {ECO:0000313|EMBL:AHJ18829.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Solute-binding protein of ABC transporter system for peptides
L1_007_000G1_scaffold_2089_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12012..12503
DNA (492bp) protein (164aa)
Peptide methionine sulfoxide reductase msrA/msrB n=2 Tax=Bifidobacterium breve RepID=F9Y2F7_BIFBU
Peptide methionine sulfoxide reductase msrA/msrB
Peptide-methionine (S)-S-oxide reductase {ECO:0000313|EMBL:EPD76875.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_000G1_scaffold_2089_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13198..14010
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C5J5_BIFBA
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ99527.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE89062.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_2089_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14022..15317
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BN26_BIFBR
putative membrane spanning protein, possibly ABC-type permease
Putative cell surface protein {ECO:0000313|EMBL:BAQ99528.1}; Uncharacterized protein {ECO:0000313|EMBL:EFE89063.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_2089_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15329..16858
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJC8_BIFBR
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:BAQ99529.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_2089_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16842..18938)
DNA (2097bp) protein (699aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BN28_BIFBR
1-deoxy-D-xylulose 5-phosphate synthase
L1_007_000G1_scaffold_2089_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19201..20193
DNA (993bp) protein (331aa)
GroES-like protein n=3 Tax=Bifidobacterium breve RepID=D4BN29_BIFBR
Alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AHJ18835.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_000G1_scaffold_2089_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20260..20760
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C5J0_BIFBA
Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit
L1_007_000G1_scaffold_2089_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20744..21652
DNA (909bp) protein (303aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3T0_BIFBR
Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit
Displaying 19 items

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