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L1_007_000G1_scaffold_2282

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_2282_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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20..874
DNA (855bp) protein (285aa)
Fic family protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2J1_BIFBU
Fic family protein
Fic family protein {ECO:0000313|EMBL:AHJ21565.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_2282_2
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1114..2358
DNA (1245bp) protein (415aa)
Uncharacterized protein (Fragment) n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWV7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE93135.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
L1_007_000G1_scaffold_2282_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3110..3352)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NP88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01987.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_007_000G1_scaffold_2282_4
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3499..4089
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2V6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ48792.1}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
L1_007_000G1_scaffold_2282_5
unknown

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comp(4190..4342)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_000G1_scaffold_2282_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4451..4678)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C692_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26993.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_2282_7
unknown

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comp(4693..4842)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_000G1_scaffold_2282_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4835..5068)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C693_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27418.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_2282_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5594..5884)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
CRISPR-associated endoribonuclease Cas2 n=3 Tax=Bifidobacterium breve RepID=F6C694_BIFBA
CRISPR-associated protein Cas2
L1_007_000G1_scaffold_2282_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5941..6972)
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Bifidobacterium breve RepID=F6C695_BIFBA
CRISPR-associated protein Cas1
L1_007_000G1_scaffold_2282_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6974..7663)
DNA (690bp) protein (230aa)
CRISPR-associated protein Cas4 n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2J8_BIFBU
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:AHJ21572.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_2282_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7702..8553)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C697_BIFBA
CRISPR-associated protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27095.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_2282_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8557..10515)
DNA (1959bp) protein (653aa)
CRISPR-associated protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2K0_BIFBU
CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:AHJ21574.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_000G1_scaffold_2282_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10518..11222)
DNA (705bp) protein (235aa)
CRISPR-associated protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2K1_BIFBU
CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:ABE96083.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_000G1_scaffold_2282_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11229..13652)
DNA (2424bp) protein (808aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:AEF26533.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEF26533.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C699_BIFBA
CRISPR-associated helicase Cas3
L1_007_000G1_scaffold_2282_16
unknown

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14296..14493
DNA (198bp) protein (66aa)

This feature has no annotations

L1_007_000G1_scaffold_2282_17
unknown

Not on your lists

14507..15064
DNA (558bp) protein (186aa)

This feature has no annotations

L1_007_000G1_scaffold_2282_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15288..18596)
DNA (3309bp) protein (1103aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6A1_BIFBA
Isoleucyl-tRNA synthetase
L1_007_000G1_scaffold_2282_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19269..19499)
DNA (231bp) protein (77aa)
rbsK2; Ribokinase (EC:2.7.1.15)
RbsK {ECO:0000313|EMBL:ADB27963.1}; Ribokinase {ECO:0000313|EMBL:ABE96088.1}; EC=2.7.1.15 {ECO:0000313|EMBL:ABE96088.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Putative ribokinase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRA2_BIFBR
Displaying 19 items

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