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L1_007_000G1_scaffold_2461

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_2461_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..742
DNA (741bp) protein (247aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Bifidobacterium breve RepID=UPI0002F3C8AD
DNA-directed RNA polymerase beta chain
L1_007_000G1_scaffold_2461_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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833..4615
DNA (3783bp) protein (1261aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
DNA-directed RNA polymerase subunit beta' n=8 Tax=Bifidobacterium RepID=F6C5Y1_BIFBA
DNA-directed RNA polymerase beta' chain
L1_007_000G1_scaffold_2461_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4608..4820
DNA (213bp) protein (71aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
DNA-directed RNA polymerase subunit beta' n=8 Tax=Bifidobacterium RepID=F6C5Y1_BIFBA
DNA-directed RNA polymerase beta' chain
L1_007_000G1_scaffold_2461_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4959..7349)
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK99_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76816.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative membrane spanning protein
L1_007_000G1_scaffold_2461_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7346..8635)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C5X9_BIFBA
Hypothetical protein with DUF58 domain
Uncharacterized protein {ECO:0000313|EMBL:AEF26356.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_000G1_scaffold_2461_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8649..15173)
DNA (6525bp) protein (2175aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2A0_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:ABE95199.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Fused conserved hypothetical protein with a fibronectin type III domain and MoxR protein
L1_007_000G1_scaffold_2461_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15145..16305)
DNA (1161bp) protein (387aa)
Kinase domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0L0_BIFBR
Kinase domain protein {ECO:0000313|EMBL:ERI87582.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Serine/threonine protein kinase
L1_007_000G1_scaffold_2461_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16428..20525
DNA (4098bp) protein (1366aa)
ATP-dependent DNA helicase, UvrD/REP family {ECO:0000313|EMBL:ABE95202.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE95202.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1M9_BIFBR
ATP-dependent DNA helicase, UvrD/REP family
L1_007_000G1_scaffold_2461_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20522..24409
DNA (3888bp) protein (1296aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
UvrD/REP helicase n=2 Tax=Bifidobacterium breve RepID=F6C5X5_BIFBA
ATP-dependent DNA helicase, UvrD/REP family
L1_007_000G1_scaffold_2461_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24581..25900
DNA (1320bp) protein (440aa)
Transporter, major facilitator family protein n=5 Tax=Bifidobacterium breve RepID=F6C5X4_BIFBA
transporter, major facilitator family protein
Putative transport protein {ECO:0000313|EMBL:BAQ99468.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_000G1_scaffold_2461_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25988..26743
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU27_BIFBR
Dihydrodipicolinate reductase
L1_007_000G1_scaffold_2461_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26864..27754
DNA (891bp) protein (297aa)
dapA2; Dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bifidobacterium breve RepID=F9Y2A6_BIFBU
L1_007_000G1_scaffold_2461_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27834..28073
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BMW4_BIFBR
Metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AHJ20688.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 13 items

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