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L1_007_000G1_scaffold_4107

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_4107_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..346)
DNA (345bp) protein (115aa)
LolE2 protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XWP9_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEY23391.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ABC transporter permease
L1_007_000G1_scaffold_4107_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(495..2069)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=C2GTC1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70981.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000G1_scaffold_4107_3
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2343..3059
DNA (717bp) protein (239aa)
Peptidase n=4 Tax=Bifidobacterium RepID=F8ASW4_BIFLN
peptidase
Peptidase C26 {ECO:0000313|EMBL:EFV38005.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_000G1_scaffold_4107_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3243..4760)
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L-arabinose isomerase n=20 Tax=root RepID=ARAA_BIFLD
araA; araa
L1_007_000G1_scaffold_4107_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4965..5657)
DNA (693bp) protein (231aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRT7_BIFL1
L-ribulose-5-phosphate 4-epimerase
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:BAJ70481.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_000G1_scaffold_4107_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5742..7388)
DNA (1647bp) protein (549aa)
Sugar (Pentulose and hexulose) kinases n=9 Tax=Bifidobacterium longum RepID=D6D9Y2_BIFLN
Sugar (pentulose and hexulose) kinases
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EIJ32602.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_000G1_scaffold_4107_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7543..8658)
DNA (1116bp) protein (372aa)
LacI-type transcriptional regulator n=11 Tax=root RepID=Q8G7J0_BIFLO
transcriptional regulator, LacI family
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY23397.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000G1_scaffold_4107_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8785..9390)
DNA (606bp) protein (202aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Ribonuclease n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R084_BIFLM
rnhB; rnhb
L1_007_000G1_scaffold_4107_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9591..10340)
DNA (750bp) protein (250aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Signal peptidase I n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GTB3_BIFLN
signal peptidase I
L1_007_000G1_scaffold_4107_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10507..10872)
DNA (366bp) protein (122aa)
50S ribosomal protein L19 n=21 Tax=root RepID=B3DTK1_BIFLD
rplS; rpls
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000G1_scaffold_4107_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11504..11842)
DNA (339bp) protein (113aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glucose-6-phosphate isomerase n=2 Tax=Bifidobacterium longum RepID=V6XUM4_BIFLN
glucose-6-phosphate isomerase
Displaying 11 items

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