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L1_007_000G1_scaffold_5459

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_5459_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..75
DNA (75bp) protein (25aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTT7_BIFLJ
hypothetical protein
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CCY96474.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000G1_scaffold_5459_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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126..956
DNA (831bp) protein (277aa)
Phosphoglycerate mutase family protein n=15 Tax=Bifidobacterium RepID=B3DSH8_BIFLD
hypothetical protein
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:CBK70646.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000G1_scaffold_5459_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1061..1681
DNA (621bp) protein (207aa)
Xanthine/uracil permease n=8 Tax=Bifidobacterium RepID=B3DSH7_BIFLD
uracil-xanthine permease
Xanthine/uracil permease {ECO:0000313|EMBL:ACD98096.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000G1_scaffold_5459_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1627..2193
DNA (567bp) protein (189aa)
Xanthine/uracil permease n=8 Tax=Bifidobacterium RepID=B3DSH7_BIFLD
uracil-xanthine transport protein
Putative permease {ECO:0000313|EMBL:EEI81449.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_000G1_scaffold_5459_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2408..4546
DNA (2139bp) protein (713aa)
Putative ATP-dependent RNA helicase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSZ1_BIFL1
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:BAJ70885.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
ATP-dependent RNA helicase
L1_007_000G1_scaffold_5459_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4826..5329
DNA (504bp) protein (168aa)
AcrR-type transcriptional regulator n=11 Tax=Bifidobacterium RepID=B3DSH5_BIFLD
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIJ24501.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_000G1_scaffold_5459_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5220..6623)
DNA (1404bp) protein (468aa)
Glycosidases (EC:3.2.1.54)
Alpha amylase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N3H4_9BIFI
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEQ55046.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_000G1_scaffold_5459_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6727..9126
DNA (2400bp) protein (800aa)
Carbon starvation protein n=6 Tax=Bifidobacterium longum RepID=B3DSH3_BIFLD
Carbon starvation protein {ECO:0000313|EMBL:BAJ70888.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
cstA; csta
L1_007_000G1_scaffold_5459_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9184..9381
DNA (198bp) protein (66aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSH2_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22083.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000G1_scaffold_5459_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9501..10553
DNA (1053bp) protein (351aa)
Phosphate/sulphate permease n=15 Tax=Bifidobacterium RepID=B3DSH1_BIFLD
phosphate transport protein
Inorganic phosphate transporter PiT {ECO:0000313|EMBL:KEY22084.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000G1_scaffold_5459_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10571..11194
DNA (624bp) protein (208aa)
Phosphate transport regulator n=14 Tax=Bifidobacterium RepID=B3DSH0_BIFLD
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:ACD98089.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000G1_scaffold_5459_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11378..12031)
DNA (654bp) protein (218aa)
Response regulator of two-component system n=15 Tax=Bifidobacterium RepID=Q8G5U9_BIFLO
two-component response regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEY22086.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000G1_scaffold_5459_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12031..13323)
DNA (1293bp) protein (431aa)
Signal transduction histidine kinase n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R474_BIFLM
two-component sensor kinase
Histidine kinase sensor of two-component system {ECO:0000313|EMBL:AHJ21040.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 13 items

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