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L1_007_000G1_scaffold_6910

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_6910_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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49..1092
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6DC36_BIFLN
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBK70057.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000G1_scaffold_6910_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1133..1861)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=V6XYC6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV34178.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_000G1_scaffold_6910_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2069..3136
DNA (1068bp) protein (356aa)
NusA antitermination factor n=6 Tax=Bifidobacterium RepID=D6ZW93_BIFLJ
nusA; NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_000G1_scaffold_6910_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3406..6258
DNA (2853bp) protein (951aa)
Translation initiation factor IF-2 n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASH2_BIFLN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
translation initiation factor IF-2
L1_007_000G1_scaffold_6910_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6409..6882
DNA (474bp) protein (158aa)
Ribosome-binding factor A n=16 Tax=Bifidobacterium RepID=RBFA_BIFLD
ribosome-binding factor
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000G1_scaffold_6910_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6884..7879
DNA (996bp) protein (332aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
tRNA pseudouridine synthase B n=3 Tax=Bifidobacterium RepID=TRUB_BIFLO
truB; tRNA pseudouridine synthase B
L1_007_000G1_scaffold_6910_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7977..9101
DNA (1125bp) protein (375aa)
RiBF n=9 Tax=Bifidobacterium RepID=E4R3C2_BIFLM
riboflavin kinase
FAD synthase {ECO:0000313|EMBL:KEY21465.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000G1_scaffold_6910_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9116..10654)
DNA (1539bp) protein (513aa)
DNA repair protein n=10 Tax=Bifidobacterium RepID=E8MF32_BIFL2
DNA repair protein
DNA repair protein RadA {ECO:0000313|EMBL:CCK35631.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_000G1_scaffold_6910_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10782..11414
DNA (633bp) protein (211aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=V6Y0A1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI80945.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_000G1_scaffold_6910_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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11606..11695
DNA (90bp) protein (30aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DQF6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI95902.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L1_007_000G1_scaffold_6910_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11848..12546)
DNA (699bp) protein (233aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Ribose-5-phosphate isomerase A n=13 Tax=Bifidobacterium RepID=RPIA_BIFLO
rpiA; rpia
L1_007_000G1_scaffold_6910_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12677..12838)
DNA (162bp) protein (54aa)
Ribonuclease H n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NBT3_9BIFI
rnhA; rnha
Ribonuclease H {ECO:0000313|EMBL:KEY21469.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying 12 items

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