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L1_007_000G1_scaffold_1352

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1352_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1306)
DNA (1305bp) protein (435aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YPL9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM52535.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
multidrug ABC transporter ATPase and permease
L1_007_000G1_scaffold_1352_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1364..1981)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52770.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator, TetR family
L1_007_000G1_scaffold_1352_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2380..2685
DNA (306bp) protein (102aa)
Putative arsenical resistance operon repressor n=3 Tax=Clostridiales RepID=G9YPM2_9FIRM
Putative arsenical resistance operon repressor {ECO:0000313|EMBL:ERI63326.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ArsR family transcriptional regulator
L1_007_000G1_scaffold_1352_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2780..3787
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25922.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted permeases
L1_007_000G1_scaffold_1352_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3801..4169
DNA (369bp) protein (123aa)
Redox-active disulfide protein 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ABZ6_9CLOT
Redox-active disulfide protein 2 {ECO:0000313|EMBL:ERI63324.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
small redox-active disulfide protein 2
L1_007_000G1_scaffold_1352_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4212..5279
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25920.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphomannose isomerase
L1_007_000G1_scaffold_1352_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5337..5591)
DNA (255bp) protein (85aa)
Heavy metal-associated domain protein n=2 Tax=Clostridiales RepID=G9YV65_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERI65012.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Copper chaperone
L1_007_000G1_scaffold_1352_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5675..6160)
DNA (486bp) protein (162aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Formate dehydrogenase subunit gamma family protein n=2 Tax=Clostridiales RepID=U2B008_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25919.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000G1_scaffold_1352_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6157..7263)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L1_007_000G1_scaffold_1352_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7378..7662)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52778.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_000G1_scaffold_1352_11
unknown

Not on your lists

7883..8080
DNA (198bp) protein (66aa)

This feature has no annotations

L1_007_000G1_scaffold_1352_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8112..8570
DNA (459bp) protein (153aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=2 Tax=Clostridiales RepID=G9YV70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25916.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative Xre family DNA-binding protein
L1_007_000G1_scaffold_1352_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8648..8881)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AU77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25915.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000G1_scaffold_1352_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9048..9467
DNA (420bp) protein (140aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridiales RepID=G9YV72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25914.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulators
L1_007_000G1_scaffold_1352_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9464..11218
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52782.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L1_007_000G1_scaffold_1352_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11193..13037
DNA (1845bp) protein (615aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AS50_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI62945.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_1352_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13125..13511
DNA (387bp) protein (129aa)
Transcriptional regulator MntR family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAV7_9CLOT
Transcriptional regulator MntR family protein {ECO:0000313|EMBL:ERI62944.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative DtxR family transcriptional regulator
L1_007_000G1_scaffold_1352_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13568..13987)
DNA (420bp) protein (140aa)
Flavodoxin n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AU72_9CLOT
Flavodoxin {ECO:0000313|EMBL:EHM40798.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000G1_scaffold_1352_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14038..14601)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YV78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI62942.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_1352_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14890..15825
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV80_9FIRM
dihydrouridine synthase family protein
L1_007_000G1_scaffold_1352_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15830..16900
DNA (1071bp) protein (357aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAW7_9CLOT
L1_007_000G1_scaffold_1352_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16904..17845
DNA (942bp) protein (314aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ00_9FIRM
L1_007_000G1_scaffold_1352_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17905..18951)
DNA (1047bp) protein (349aa)
GroES-like protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV83_9FIRM
GroES-like protein {ECO:0000313|EMBL:EHM40804.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_007_000G1_scaffold_1352_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18957..19535)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CQ62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71387.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_1352_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19637..22543
DNA (2907bp) protein (969aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
TIGR00375 family protein n=2 Tax=Clostridiales RepID=U2CVS3_9CLOT
hypothetical protein
L1_007_000G1_scaffold_1352_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22623..24023)
DNA (1401bp) protein (467aa)
Putative HTH-type transcriptional regulatory protein GabR n=3 Tax=Clostridiales RepID=G9YV87_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:EHM40808.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator
L1_007_000G1_scaffold_1352_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24219..24989
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=3 Tax=Clostridiales RepID=G9YV88_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative RNA polymerase sigma factor
L1_007_000G1_scaffold_1352_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25346..26452
DNA (1107bp) protein (369aa)
TIGR00300 family protein n=2 Tax=Clostridiales RepID=H1CIZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51985.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_000G1_scaffold_1352_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26507..27454)
DNA (948bp) protein (316aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51986.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted permeases
L1_007_000G1_scaffold_1352_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27590..27853
DNA (264bp) protein (88aa)
Sporulation protein, YlmC/YmxH family n=3 Tax=Clostridiales RepID=G9YKS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51987.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
YlmC/YmxH family sporulation protein
Displaying items 1-30 of 35 in total

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