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L1_007_000G1_scaffold_1705

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_1705_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(346..594)
DNA (249bp) protein (83aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YSA0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI62645.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L1_007_000G1_scaffold_1705_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

803..2182
DNA (1380bp) protein (460aa)
GumN protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSA1_9FIRM
GumN protein {ECO:0000313|EMBL:EHM46409.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
GumN family protein
L1_007_000G1_scaffold_1705_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2511..3779
DNA (1269bp) protein (423aa)
Putative guanine deaminase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ATD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56656.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_000G1_scaffold_1705_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4000..4521
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AR99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62640.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_1705_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4564..5445
DNA (882bp) protein (294aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Clostridiales RepID=G9YSA6_9FIRM
L1_007_000G1_scaffold_1705_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5757..7748)
DNA (1992bp) protein (664aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32671.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000G1_scaffold_1705_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7767..8711)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32670.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000G1_scaffold_1705_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8844..9752
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=U2D7I9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32669.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulator
L1_007_000G1_scaffold_1705_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9828..10631)
DNA (804bp) protein (268aa)
Peptidase propeptide and YPEB domain protein n=3 Tax=Clostridiales RepID=G9YQ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32668.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000G1_scaffold_1705_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10860..11159
DNA (300bp) protein (100aa)
30S ribosomal protein S6 n=3 Tax=Clostridiales RepID=G9YQV8_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsF; 30S ribosomal protein S6
L1_007_000G1_scaffold_1705_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11176..11664
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=3 Tax=Clostridiales RepID=G9YQV9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ssb; single-stranded DNA-binding protein
L1_007_000G1_scaffold_1705_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11744..11983
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=3 Tax=Clostridiales RepID=G9YQW0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpsR; 30S ribosomal protein S18
L1_007_000G1_scaffold_1705_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12324..14429)
DNA (2106bp) protein (702aa)
Histidine kinase A domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D101_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:ERI73186.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_1705_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14479..15180)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56667.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_1705_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15327..16556
DNA (1230bp) protein (410aa)
Serine proteinase inhibitor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW3_9FIRM
Serine proteinase inhibitor {ECO:0000313|EMBL:EHM50677.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000G1_scaffold_1705_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17104..17628
DNA (525bp) protein (175aa)
4'-phosphopantetheinyl transferase sfp domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW4_9FIRM
4'-phosphopantetheinyl transferase sfp domain protein {ECO:0000313|EMBL:EHM50678.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
4'-phosphopantetheinyl transferase
L1_007_000G1_scaffold_1705_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17704..18798
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29682.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
L1_007_000G1_scaffold_1705_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18795..19868
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50680.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L1_007_000G1_scaffold_1705_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19944..20888
DNA (945bp) protein (315aa)
Putative glucokinase n=3 Tax=Clostridiales RepID=G9YQW7_9FIRM
Putative glucokinase {ECO:0000313|EMBL:EHM50681.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ROK family protein
L1_007_000G1_scaffold_1705_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20942..21217)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29685.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000G1_scaffold_1705_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21392..23830
DNA (2439bp) protein (813aa)
HAD ATPase, P-type, family IC n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52639.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L1_007_000G1_scaffold_1705_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23834..24292
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29687.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
acetyltransferase
L1_007_000G1_scaffold_1705_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24485..25591
DNA (1107bp) protein (369aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B842_9CLOT
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERI67983.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
glycosyltransferase
L1_007_000G1_scaffold_1705_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25614..27155
DNA (1542bp) protein (514aa)
Putative ATP synthase F0, A subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52642.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
O-antigen polymerase
L1_007_000G1_scaffold_1705_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27326..27439
DNA (114bp) protein (38aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM46650.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Displaying 25 items

View Taxonomy