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L1_007_000G1_scaffold_2165

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_2165_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..824)
DNA (822bp) protein (274aa)
AP endonuclease, family 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BGS7_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI71088.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
xylose isomerase domain-containing protein TIM barrel
L1_007_000G1_scaffold_2165_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(821..1330)
DNA (510bp) protein (170aa)
HAD phosphatase, family IIIA n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CPC3_9CLOT
HAD phosphatase, family IIIA {ECO:0000313|EMBL:ERI71087.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
HAD family phosphatase
L1_007_000G1_scaffold_2165_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1418..2194
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YX12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32759.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000G1_scaffold_2165_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2259..2876
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38047.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Acetyltransferases
L1_007_000G1_scaffold_2165_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2939..3121)
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=3 Tax=Clostridiales RepID=G9YX14_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsU; 30S ribosomal protein S21
L1_007_000G1_scaffold_2165_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3289..5724)
DNA (2436bp) protein (812aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Clostridiales RepID=H1CF23_9FIRM
L1_007_000G1_scaffold_2165_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5864..6322
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54500.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_000G1_scaffold_2165_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6326..6772
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32764.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000G1_scaffold_2165_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6923..7057)
DNA (135bp) protein (45aa)
Signal peptide protein, YSIRK family (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54498.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_000G1_scaffold_2165_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7045..8250)
DNA (1206bp) protein (402aa)
Signal peptide protein, YSIRK family (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWU2_9FIRM
Signal peptide protein, YSIRK family {ECO:0000313|EMBL:EHM38201.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_000G1_scaffold_2165_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8247..8753)
DNA (507bp) protein (169aa)
RNA polymerase sigma-70 factor, sigma-E family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BGY4_9CLOT
RNA polymerase sigma-70 factor, sigma-E family {ECO:0000313|EMBL:ERI71133.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000G1_scaffold_2165_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8866..9225)
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CPG9_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_2165_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9238..10725)
DNA (1488bp) protein (496aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CV31_9CLOT
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:ERI71131.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative LytR family regulatory protein
L1_007_000G1_scaffold_2165_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10742..12166)
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CF30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32769.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative LytR family regulatory protein
L1_007_000G1_scaffold_2165_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12166..13374)
DNA (1209bp) protein (403aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=2 Tax=Clostridiales RepID=H1CF31_9FIRM
L1_007_000G1_scaffold_2165_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13394..13717)
DNA (324bp) protein (108aa)
RNA-binding protein, YhbY family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54515.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_000G1_scaffold_2165_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13760..14350)
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rdgB; nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWU9_9FIRM
L1_007_000G1_scaffold_2165_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14355..15071)
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=3 Tax=Clostridiales RepID=G9YWV0_9FIRM
L1_007_000G1_scaffold_2165_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15130..16029)
DNA (900bp) protein (300aa)
Signal recognition particle receptor FtsY n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWV1_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
signal recognition particle-docking protein FtsY
L1_007_000G1_scaffold_2165_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16053..16550)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CM66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68416.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000G1_scaffold_2165_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16796..20365)
DNA (3570bp) protein (1190aa)
Chromosome partition protein Smc n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B877_9CLOT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
smc; chromosome segregation protein SMC
Displaying 21 items

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