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L1_007_000G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_174_1
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)
Elongation factor Tu n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E5I7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
tufB; protein chain elongation factor EF-Tu (duplicate of tufA)
L1_007_000G1_scaffold_174_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(544..927)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02657.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_174_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(1108..1293)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02656.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Copper chaperone
L1_007_000G1_scaffold_174_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(1290..3314)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02655.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ferrous iron transporter FeoB
L1_007_000G1_scaffold_174_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(3417..3629)
DNA (213bp) protein (71aa)
FeoA domain n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZT4_9FIRM
FeoA domain {ECO:0000313|EMBL:CDB02654.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
FeoA domain.
L1_007_000G1_scaffold_174_6
unknown

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comp(3777..4094)
DNA (318bp) protein (106aa)

This feature has no annotations

L1_007_000G1_scaffold_174_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4130..4762)
DNA (633bp) protein (211aa)
DNA-directed RNA polymerase sigma subunit SigH n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPY6_9FIRM
DNA-directed RNA polymerase sigma subunit SigH {ECO:0000313|EMBL:CDB02653.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
RNA polymerase sigma factor
L1_007_000G1_scaffold_174_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4728..5504)
DNA (777bp) protein (259aa)
spoU3; RNA methyltransferase, TrmH family group 3 (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKQ9_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDB02652.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_174_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(5515..6000)
DNA (486bp) protein (162aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0T7_9FIRM
L1_007_000G1_scaffold_174_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(6021..6851)
DNA (831bp) protein (277aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERW7_9FIRM
L1_007_000G1_scaffold_174_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(6844..7284)
DNA (441bp) protein (147aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Mini-ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZS9_9FIRM
hypothetical protein
L1_007_000G1_scaffold_174_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(7320..8726)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
cysS; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPY2_9FIRM
L1_007_000G1_scaffold_174_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(8713..9399)
DNA (687bp) protein (229aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKQ3_9FIRM
L1_007_000G1_scaffold_174_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(9424..9936)
DNA (513bp) protein (171aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0T4_9FIRM
peptidyl-prolyl cis-trans isomerase
L1_007_000G1_scaffold_174_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(9927..10499)
DNA (573bp) protein (191aa)
Chromate transport protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERW4_9FIRM
Chromate transport protein {ECO:0000313|EMBL:CDB02645.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
chromate transporter
L1_007_000G1_scaffold_174_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10496..10972)
DNA (477bp) protein (159aa)
Chromate transporter n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZS4_9FIRM
Chromate transporter {ECO:0000313|EMBL:CDB02644.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
chromate transporter
L1_007_000G1_scaffold_174_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


comp(11071..12798)
DNA (1728bp) protein (576aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ProS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPX9_9FIRM
L1_007_000G1_scaffold_174_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12812..13951)
DNA (1140bp) protein (380aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKP9_9FIRM
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L1_007_000G1_scaffold_174_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(13980..15104)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02641.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
PilT domain-containing protein
L1_007_000G1_scaffold_174_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15171..15644)
DNA (474bp) protein (158aa)
Transcriptional regulator CarD family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERW0_9FIRM
Transcriptional regulator CarD family {ECO:0000313|EMBL:CDB02640.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
CarD family transcriptional regulator
L1_007_000G1_scaffold_174_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

15881..16558
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02639.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Two-component system transcriptional regulator
L1_007_000G1_scaffold_174_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

16542..18023
DNA (1482bp) protein (494aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPX7_9FIRM
signal transduction histidine kinase
L1_007_000G1_scaffold_174_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(18135..19508)
DNA (1374bp) protein (458aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKP4_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_174_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(19789..21744)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02636.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
elongation factor G
L1_007_000G1_scaffold_174_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

21911..26719
DNA (4809bp) protein (1603aa)
Cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERV7_9FIRM
Cytidylyltransferase {ECO:0000313|EMBL:CDB02635.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
cytidylyltransferase
L1_007_000G1_scaffold_174_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

26713..27693
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02634.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
malate/lactate dehydrogenase
L1_007_000G1_scaffold_174_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

27704..28813
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02633.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NADPH-dependent FMN reductase
L1_007_000G1_scaffold_174_28
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29337..29804)
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZTD5_9FIRM
L1_007_000G1_scaffold_174_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29825..31024)
DNA (1200bp) protein (400aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZD73_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L1_007_000G1_scaffold_174_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31036..31683)
DNA (648bp) protein (216aa)
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase alpha subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6YSE3_9CLOT
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDD38893.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Displaying items 1-30 of 129 in total

View Taxonomy