ggKbase home page

L1_007_000G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_241_1
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

226..2145
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LGV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY76714.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
putative surface layer protein
L1_007_000G1_scaffold_241_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

2375..2860
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02415.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_241_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

2930..4099
DNA (1170bp) protein (390aa)
Cysteine desulfurase NifS n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F050_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDB02416.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
iscS2; cysteine desulfurase
L1_007_000G1_scaffold_241_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

4106..4552
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02417.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NifU domain-containing protein
L1_007_000G1_scaffold_241_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

4527..5585
DNA (1059bp) protein (353aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPA3_9FIRM
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
L1_007_000G1_scaffold_241_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

5676..5888
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02419.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_241_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


6081..8699
DNA (2619bp) protein (873aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
alaS; alanyl-tRNA synthetase AlaS (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER55_9FIRM
L1_007_000G1_scaffold_241_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

8753..8998
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F056_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02421.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein UPF0297
L1_007_000G1_scaffold_241_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

9067..9492
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Putative Holliday junction resolvase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK33_9FIRM
Holliday junction resolvase YqgF
L1_007_000G1_scaffold_241_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(9653..9865)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02423.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Zn-ribbon nucleic-acid-binding protein
L1_007_000G1_scaffold_241_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10064..10360)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02424.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Peptidoglycan-binding LysM
L1_007_000G1_scaffold_241_12
unknown

Not on your lists

10446..10613
DNA (168bp) protein (56aa)

This feature has no annotations

L1_007_000G1_scaffold_241_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

10643..11425
DNA (783bp) protein (261aa)
GDSL-like lipase/acylhydrolase family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER60_9FIRM
GDSL-like lipase/acylhydrolase family protein {ECO:0000313|EMBL:CDB02425.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Lysophospholipase L1 and related esterases
L1_007_000G1_scaffold_241_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(11430..12161)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F063_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02426.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_000G1_scaffold_241_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12180..13469)
DNA (1290bp) protein (430aa)
Aluminum resistance protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK39_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:CDB02427.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
aluminum resistance protein
L1_007_000G1_scaffold_241_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(13471..14598)
DNA (1128bp) protein (376aa)
Site-specific recombinase phage integrase family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPB4_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDB02428.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
integrase family protein
L1_007_000G1_scaffold_241_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14541..15503)
DNA (963bp) protein (321aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ46_9FIRM
L1_007_000G1_scaffold_241_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15503..17308)
DNA (1806bp) protein (602aa)
DNA mismatch repair protein MutL n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER68_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA mismatch repair protein MutL
L1_007_000G1_scaffold_241_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(17301..19910)
DNA (2610bp) protein (870aa)
DNA mismatch repair protein MutS n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F069_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA mismatch repair protein MutS
L1_007_000G1_scaffold_241_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(19948..21138)
DNA (1191bp) protein (397aa)
aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK45_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:CDB02432.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_241_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21171..21950)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02433.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hemolysin A
L1_007_000G1_scaffold_241_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21967..23829)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ51_9FIRM
L1_007_000G1_scaffold_241_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(23857..24753)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02435.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ispA; geranyltranstransferase
L1_007_000G1_scaffold_241_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24763..24942)
DNA (180bp) protein (60aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease VII small subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F073_9FIRM
L1_007_000G1_scaffold_241_25
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(24932..26086)
DNA (1155bp) protein (385aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DM90_9FIRM
L1_007_000G1_scaffold_241_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(26077..27024)
DNA (948bp) protein (316aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02438.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_241_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(27021..27410)
DNA (390bp) protein (130aa)
N utilization substance protein B homolog n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ56_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NusB antitermination factor
L1_007_000G1_scaffold_241_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(27403..27759)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02440.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_000G1_scaffold_241_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(27833..29515)
DNA (1683bp) protein (561aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F077_9FIRM
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:CDB02441.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_000G1_scaffold_241_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(29505..29747)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02442.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Displaying items 1-30 of 108 in total

View Taxonomy