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L1_007_000G1_scaffold_592

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_592_1
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..127
DNA (126bp) protein (42aa)
Elongation factor Tu n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CH28_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
translation elongation factor 1A (EF-1A/EF-Tu)
L1_007_000G1_scaffold_592_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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572..1270
DNA (699bp) protein (233aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYU2_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDB02329.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
transcriptional regulator
L1_007_000G1_scaffold_592_3
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1641..3149
DNA (1509bp) protein (503aa)
Sodium/alanine symporter family protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSS3_9CLOT
Sodium/alanine symporter family protein {ECO:0000313|EMBL:CDF58431.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
yrbD; sodium/proton-dependent alanine transporter
L1_007_000G1_scaffold_592_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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3190..4923
DNA (1734bp) protein (578aa)
Peptidase M28 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQW8_9FIRM
Peptidase M28 {ECO:0000313|EMBL:CDB02330.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
peptidase M28
L1_007_000G1_scaffold_592_5
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4987..5694
DNA (708bp) protein (236aa)
Putative Hydantoin racemase {ECO:0000313|EMBL:CEO88875.1}; EC=5.1.99.5 {ECO:0000313|EMBL:CEO88875.1};; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHS1_9FIRM
Hydantoin racemase
L1_007_000G1_scaffold_592_6
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

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5730..6854
DNA (1125bp) protein (375aa)
Putative hydrolase YxeP n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NY85_9BACL
Putative hydrolase {ECO:0000313|EMBL:KKB39996.1}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacterium MTCC 8252.;"
amidohydrolase
L1_007_000G1_scaffold_592_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7207..7938
DNA (732bp) protein (244aa)
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1E7_9FIRM
3-dehydroquinate dehydratase {ECO:0000313|EMBL:CDB02846.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
3-dehydroquinate dehydratase, type I
L1_007_000G1_scaffold_592_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7940..8788
DNA (849bp) protein (283aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESE4_9FIRM
ABC-type cobalt transport system, ATPase component
L1_007_000G1_scaffold_592_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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8764..9633
DNA (870bp) protein (290aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
cbiO1; cobalt transporter ATP-binding protein CbiO (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0B5_9FIRM
L1_007_000G1_scaffold_592_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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9627..10427
DNA (801bp) protein (267aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQF4_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
cbiQ1; cobalt transporter permease protein CbiQ
L1_007_000G1_scaffold_592_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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10429..11064
DNA (636bp) protein (212aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLA2_9FIRM
L1_007_000G1_scaffold_592_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(12027..12704)
DNA (678bp) protein (226aa)
Peptidase M23 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESD9_9FIRM
Peptidase M23 {ECO:0000313|EMBL:CDB02840.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
peptidase M23
L1_007_000G1_scaffold_592_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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12865..14109
DNA (1245bp) protein (415aa)
tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0B0_9FIRM
tRNA (Guanine-N(7)-)-methyltransferase {ECO:0000313|EMBL:CDB02839.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
aspartate aminotransferase
L1_007_000G1_scaffold_592_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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14174..14428
DNA (255bp) protein (85aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQE9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDB02838.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
seryl-tRNA synthetase-like protein
L1_007_000G1_scaffold_592_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(14554..14748)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FL97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02837.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_000G1_scaffold_592_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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14836..16500
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02836.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
TGS domain-containing protein
L1_007_000G1_scaffold_592_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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16547..17464
DNA (918bp) protein (306aa)
Kinase PfkB family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ESD2_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDB02835.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
sugar kinase
L1_007_000G1_scaffold_592_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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17457..18365
DNA (909bp) protein (303aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0A5_9FIRM
Indigoidine synthase A family protein
L1_007_000G1_scaffold_592_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(18456..19130)
DNA (675bp) protein (225aa)
Putative ATP binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3U8_9FIRM
Putative ATP binding protein {ECO:0000313|EMBL:CCX74878.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_007_000G1_scaffold_592_20
unknown

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comp(19552..19761)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_007_000G1_scaffold_592_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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20111..20422
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQI1_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rpsJ; 30S ribosomal protein S10
L1_007_000G1_scaffold_592_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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20566..21201
DNA (636bp) protein (212aa)
50S ribosomal protein L3 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZG1_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
50S ribosomal protein L3
L1_007_000G1_scaffold_592_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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21227..21850
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJE4_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rplD; 50S ribosomal protein L4
L1_007_000G1_scaffold_592_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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21850..22140
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENL4_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rplW; 50S ribosomal subunit protein L23
L1_007_000G1_scaffold_592_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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22159..22992
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYI3_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
50S ribosomal protein L2
L1_007_000G1_scaffold_592_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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23011..23292
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQI7_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rpsS; 30S ribosomal protein S19
L1_007_000G1_scaffold_592_27
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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23311..23646
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E3V1_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
50S ribosomal protein L22
L1_007_000G1_scaffold_592_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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23663..24547
DNA (885bp) protein (295aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYN6_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rpsC; 30S ribosomal protein S3
L1_007_000G1_scaffold_592_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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24576..25007
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQQ2_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rplP; 50S ribosomal protein L16
L1_007_000G1_scaffold_592_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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25007..25210
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZP4_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
50S ribosomal protein L29
Displaying items 1-30 of 81 in total

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