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L1_007_000M1_scaffold_4412

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_4412_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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273..1259
DNA (987bp) protein (329aa)
Kinase, PfkB family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX9_BACVU
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS27909.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
PfkB family carbohydrate kinase
L1_007_000M1_scaffold_4412_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1303..2997
DNA (1695bp) protein (565aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:KDS54232.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS54232.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Carboxy-terminal processing protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYM0_BACV8
carboxy-terminal processing protease
L1_007_000M1_scaffold_4412_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3063..5360)
DNA (2298bp) protein (766aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAY1_BACVU
Cna B-type domain protein {ECO:0000313|EMBL:KDS27907.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000M1_scaffold_4412_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5482..6867
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Two-component system sensor histidine kinase n=7 Tax=root RepID=A6KYL8_BACV8
two-component system sensor histidine kinase
L1_007_000M1_scaffold_4412_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6892..7593
DNA (702bp) protein (234aa)
Two-component system response regulator n=4 Tax=root RepID=A6KYL7_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY78628.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_4412_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7511..8593)
DNA (1083bp) protein (361aa)
Acetyltransferase, GNAT family n=3 Tax=Bacteroides RepID=C6Z0I5_9BACE
Acetyltransferase family protein {ECO:0000313|EMBL:KDS27903.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
acetyltransferase
L1_007_000M1_scaffold_4412_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8707..9198)
DNA (492bp) protein (164aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Bacteroides vulgatus RepID=R9H4C1_BACVU
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KDS54227.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_4412_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9244..9768)
DNA (525bp) protein (175aa)
Acetyltransferase n=5 Tax=Bacteroides RepID=A6KYL4_BACV8
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EOR98619.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_4412_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9778..11559)
DNA (1782bp) protein (594aa)
Peptidase, M24 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB62_BACVU
Metallopeptidase M24 family protein {ECO:0000313|EMBL:KDS27900.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
aminopeptidase
L1_007_000M1_scaffold_4412_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11728..11919
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=14 Tax=Bacteroides RepID=RS21_BACV8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_4412_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11997..12878
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=6 Tax=Bacteroides RepID=A6KYL1_BACV8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_4412_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12893..13192
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=7 Tax=Bacteroides RepID=A6KYL0_BACV8
sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:KDS27897.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_4412_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13732..14835
DNA (1104bp) protein (368aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=7 Tax=Bacteroides RepID=EFTU_BACV8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_4412_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14982..15176
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=5 Tax=Bacteroides RepID=C6Z0J3_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
preprotein translocase subunit SecE
L1_007_000M1_scaffold_4412_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15190..15732
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=7 Tax=Bacteroides RepID=A6KYK8_BACV8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_4412_16
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15793..16236
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=13 Tax=Bacteroides RepID=RL11_BACV8
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L1_007_000M1_scaffold_4412_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


16252..16950
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=7 Tax=Bacteroides RepID=RL1_BACV8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_4412_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


16966..17484
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=7 Tax=Bacteroides RepID=A6KYK5_BACV8
rplJ; 50S ribosomal protein L10
Uncharacterized protein {ECO:0000313|EMBL:EIY78641.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_4412_19
unknown

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17531..17605
DNA (75bp) protein (25aa)
LSU ribosomal protein L12P
Displaying 19 items

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