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L1_007_000M1_scaffold_3019

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3019_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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216..1367
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21926.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
AhpC/TSA family.
L1_007_000M1_scaffold_3019_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1483..2013
DNA (531bp) protein (177aa)
Transcription elongation factor GreA n=3 Tax=Bacteroides RepID=A5ZBQ6_9BACE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcription elongation factor GreA
L1_007_000M1_scaffold_3019_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2065..2457
DNA (393bp) protein (131aa)
Histidine triad domain protein n=3 Tax=Bacteroides RepID=A5ZBQ5_9BACE
Histidine triad domain protein {ECO:0000313|EMBL:EDM21924.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L1_007_000M1_scaffold_3019_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2534..3454)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PJ44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16253.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
permease
L1_007_000M1_scaffold_3019_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3457..4686)
DNA (1230bp) protein (410aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=A5ZBQ3_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM21922.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
sugar transporter
L1_007_000M1_scaffold_3019_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4786..4896
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZBQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74389.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_000M1_scaffold_3019_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5008..5490
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=3 Tax=Bacteroides caccae RepID=A5ZBQ1_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EDM21920.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_3019_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5831..7273
DNA (1443bp) protein (481aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glutamate decarboxylase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UFX5_9BACE
glutamate decarboxylase
L1_007_000M1_scaffold_3019_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7242..8249
DNA (1008bp) protein (336aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=3 Tax=Bacteroides RepID=A5ZBP9_9BACE
L1_007_000M1_scaffold_3019_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8357..9133)
DNA (777bp) protein (259aa)
Ion channel n=3 Tax=Bacteroides RepID=A5ZBP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16246.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
potassium channel subunit
L1_007_000M1_scaffold_3019_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9350..10960
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8UPW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16245.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Amino acid transporters
L1_007_000M1_scaffold_3019_12
unknown

Not on your lists

comp(11344..11517)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_000M1_scaffold_3019_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11765..13348)
DNA (1584bp) protein (528aa)
Resolvase, N-terminal domain protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R9I9_9BACE
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEO45698.2}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
resolvase domain-containing protein
L1_007_000M1_scaffold_3019_14
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13360..13488)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AMK4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC52040.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
L1_007_000M1_scaffold_3019_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13704..14330)
DNA (627bp) protein (209aa)
Resolvase, N-terminal domain protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JVM6_9BACE
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEZ24275.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Resolvase domain
L1_007_000M1_scaffold_3019_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14462..14686
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HDM0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EYA37116.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L1_007_000M1_scaffold_3019_17
unknown

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15007..15567
DNA (561bp) protein (187aa)

This feature has no annotations

L1_007_000M1_scaffold_3019_18
unknown

Not on your lists

15564..15923
DNA (360bp) protein (120aa)

This feature has no annotations

L1_007_000M1_scaffold_3019_19
unknown

Not on your lists

15928..16203
DNA (276bp) protein (92aa)

This feature has no annotations

L1_007_000M1_scaffold_3019_20
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16297..17295)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AMK1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC52037.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
L1_007_000M1_scaffold_3019_21
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17403..17600)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3R9J3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC52036.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
hypothetical protein
L1_007_000M1_scaffold_3019_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18020..19657
DNA (1638bp) protein (546aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UY10_9BACE
alpha-galactosidase
L1_007_000M1_scaffold_3019_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19726..20532)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16097.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_000M1_scaffold_3019_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20543..20911)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=2 Tax=Bacteroides caccae RepID=A5ZBP1_9BACE
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDM21910.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, GntR family
L1_007_000M1_scaffold_3019_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20923..21774)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6F1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73590.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_3019_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21781..22626)
DNA (846bp) protein (282aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides caccae RepID=A5ZBN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16094.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-type multidrug transport system, ATPase component
L1_007_000M1_scaffold_3019_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22851..24317)
DNA (1467bp) protein (489aa)
Tetratricopeptide repeat protein n=3 Tax=Bacteroides RepID=A5ZBN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73592.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_3019_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24338..25282)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBN7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16092.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
phosphate ABC transporter substrate-binding protein
L1_007_000M1_scaffold_3019_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25290..26105)
DNA (816bp) protein (272aa)
TonB-dependent receptor n=2 Tax=Bacteroides caccae RepID=A5ZBN6_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EDM21905.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
outer membrane transport energization protein TonB (TC 2.C.1.1.1)
L1_007_000M1_scaffold_3019_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26132..26785)
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73595.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Biopolymer transport protein ExbD/TolR.
Displaying items 1-30 of 33 in total

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