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L1_007_000M1_scaffold_3066

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3066_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZD36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74971.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein
L1_007_000M1_scaffold_3066_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(507..785)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V667_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74972.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_3066_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1116..2033)
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYW7_9BACE
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIY21956.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
dTDP-4-dehydrorhamnose reductase
L1_007_000M1_scaffold_3066_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2106..3365)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V9J0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21957.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_000M1_scaffold_3066_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3658..3921)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAF0_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM22401.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator, AraC family
L1_007_000M1_scaffold_3066_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3959..4498)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAF0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74975.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
transcriptional regulator, AraC family
L1_007_000M1_scaffold_3066_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4528..5430)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides caccae RepID=A5ZD31_9BACE
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM22400.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator
L1_007_000M1_scaffold_3066_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5599..6618
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V671_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21960.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
mRNA-binding protein
L1_007_000M1_scaffold_3066_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6640..7179)
DNA (540bp) protein (180aa)
Occludin n=2 Tax=Bacteroides RepID=I9PYX0_9BACE
Occludin {ECO:0000313|EMBL:CCZ74978.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_3066_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7413..9056)
DNA (1644bp) protein (548aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EDM22397.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EDM22397.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
aspartate aminotransferase (EC:2.6.1.1)
Aspartate 4-decarboxylase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD28_9BACE
L1_007_000M1_scaffold_3066_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9115..10809)
DNA (1695bp) protein (565aa)
Aspartate-alanine antiporter n=2 Tax=Bacteroides RepID=A5ZD27_9BACE
Aspartate-alanine antiporter {ECO:0000313|EMBL:CCZ74980.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted permease
L1_007_000M1_scaffold_3066_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10927..12147
DNA (1221bp) protein (407aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Formate--tetrahydrofolate ligase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ENV7_9BACE
formate--tetrahydrofolate ligase
L1_007_000M1_scaffold_3066_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12125..12529
DNA (405bp) protein (135aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Formate--tetrahydrofolate ligase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD26_9BACE
formate--tetrahydrofolate ligase
L1_007_000M1_scaffold_3066_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12526..12699)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UV48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74991.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_000M1_scaffold_3066_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12859..14139)
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Bacteroides RepID=A5ZD25_9BACE
L1_007_000M1_scaffold_3066_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14271..15005)
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZD24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22393.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_000M1_scaffold_3066_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15032..15601)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V9K0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74994.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L1_007_000M1_scaffold_3066_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15624..16085)
DNA (462bp) protein (154aa)
Aspartate carbamoyltransferase regulatory chain n=4 Tax=root RepID=A5ZD22_9BACE
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
aspartate carbamoyltransferase, regulatory subunit
L1_007_000M1_scaffold_3066_19
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16082..17113)
DNA (1032bp) protein (344aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Bacteroides RepID=R6SZR0_9BACE
L1_007_000M1_scaffold_3066_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17121..17900)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD20_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22389.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_000M1_scaffold_3066_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17924..18268)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZD19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22388.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_000M1_scaffold_3066_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18493..18894)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V9K5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74999.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_3066_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19032..19979
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75000.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_3066_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20332..20904
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PZ43_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22056.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Transcription antiterminator
L1_007_000M1_scaffold_3066_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20952..22877
DNA (1926bp) protein (642aa)
Polysaccharide biosynthesis protein n=2 Tax=Bacteroides caccae RepID=A5ZCW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22057.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
nucleoside-diphosphate sugar epimerase/dehydrase
L1_007_000M1_scaffold_3066_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22894..23724
DNA (831bp) protein (277aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCW4_9BACE
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EDM22333.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
membrane protein involved in polysaccharide export
L1_007_000M1_scaffold_3066_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23734..26154
DNA (2421bp) protein (807aa)
Capsular exopolysaccharide family protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EP43_9BACE
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EIY22059.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
capsular exopolysaccharide family
L1_007_000M1_scaffold_3066_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26171..26269
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V6G5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22060.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_007_000M1_scaffold_3066_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26322..26516
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PZ48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22061.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_007_000M1_scaffold_3066_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26688..27602
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V9T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22062.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycosyl transferase family protein
Displaying items 1-30 of 40 in total

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