ggKbase home page

L1_007_000M1_scaffold_3532

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_3532_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

232..684
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GUX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21195.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L1_007_000M1_scaffold_3532_2
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

728..2743
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E8T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84536.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_3
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2740..5370
DNA (2631bp) protein (877aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E719_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84537.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5708..6376)
DNA (669bp) protein (223aa)
Site-specific recombinase XerD n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIJ0_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK93437.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_3532_5
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6507..6773
DNA (267bp) protein (89aa)
Global regulator protein family n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DWK4_9FIRM
Global regulator protein family {ECO:0000313|EMBL:CCX84538.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Global regulator protein family.
L1_007_000M1_scaffold_3532_6
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6899..8251
DNA (1353bp) protein (451aa)
Flagellin and related hook-associated proteins n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E067_9FIRM
Flagellin and related hook-associated proteins {ECO:0000313|EMBL:CCX84539.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Flagellin and related hook-associated proteins
L1_007_000M1_scaffold_3532_7
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8370..8747
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DWF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84540.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
transposase IS4 family protein
L1_007_000M1_scaffold_3532_8
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8838..9266
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E8T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84541.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9365..9580
DNA (216bp) protein (72aa)
Predicted transcriptional regulators n=2 Tax=Eubacterium rectale RepID=D4JKQ8_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK89504.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_007_000M1_scaffold_3532_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9595..10029
DNA (435bp) protein (145aa)
Predicted transcriptional regulators n=7 Tax=root RepID=D4JRJ5_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK95714.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_000M1_scaffold_3532_11
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10152..10430)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DYX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81792.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_12
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10427..11650)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
6-phosphofructokinase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E0M2_9FIRM
6-phosphofructokinase
L1_007_000M1_scaffold_3532_13
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11874..12491
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DNF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81790.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_14
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12559..13323
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DSH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81789.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_15
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13356..13970
DNA (615bp) protein (205aa)
Flavin reductase domain-containing protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DNJ8_9FIRM
Flavin reductase domain-containing protein {ECO:0000313|EMBL:CCX81788.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_16
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14001..15872
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81787.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_17
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16010..17539
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E0L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81786.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_18
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17794..19041
DNA (1248bp) protein (416aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DNF2_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L1_007_000M1_scaffold_3532_19
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19278..20627
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DSH2_9FIRM
hypothetical protein
L1_007_000M1_scaffold_3532_20
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20629..21318
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DSG8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCX81779.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_3532_21
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21333..22241
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DYV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81777.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_22
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22412..23248)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DNE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81775.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_23
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23375..25177
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DNI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81773.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
multidrug ABC transporter ATPase/permease
L1_007_000M1_scaffold_3532_24
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25170..26837
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DYV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81772.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
tycE; ABC transporter ATP-binding protein/permease
L1_007_000M1_scaffold_3532_25
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27049..28218
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E0K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81771.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_26
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28228..28965
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DND8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81770.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_27
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28962..30269
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DSF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81769.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_3532_28
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(30614..31225)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZPQ7_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO93343.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
cell wall surface anchor family protein
L1_007_000M1_scaffold_3532_29
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31484..32224
DNA (741bp) protein (247aa)
Two-component system, OmpR family, response regulator n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A3_EUBE2
two-component system, OmpR family, response regulator
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:ACR73181.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L1_007_000M1_scaffold_3532_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32383..33300
DNA (918bp) protein (306aa)
Antibiotic transport system ATP-binding protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A2_EUBE2
antibiotic transport system ATP-binding protein
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:ACR73180.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying items 1-30 of 42 in total

View Taxonomy