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L1_007_000M1_scaffold_1016

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1016_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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450..1100
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JK60_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERJ86636.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
HAD-superfamily hydrolase
L1_007_000M1_scaffold_1016_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1153..2151
DNA (999bp) protein (333aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K309_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ86637.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2374..4317
DNA (1944bp) protein (648aa)
Chaperone protein HtpG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHS4_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Molecular chaperone, HSP90 family
L1_007_000M1_scaffold_1016_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4632..5477)
DNA (846bp) protein (282aa)
ABC 3 transport family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Z4_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:ERJ86617.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter
L1_007_000M1_scaffold_1016_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5474..6181)
DNA (708bp) protein (236aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ86618.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6198..7196)
DNA (999bp) protein (333aa)
ABC transporter, substrate-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LAY2_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ERJ86619.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
metal ion ABC transporter periplasmic protein/surface adhesin
L1_007_000M1_scaffold_1016_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7446..7736
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JK47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86621.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7850..8794)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86622.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative protease of the Abi (CAAX) family
L1_007_000M1_scaffold_1016_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8999..9763
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86623.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9900..10628
DNA (729bp) protein (243aa)
Metallo-beta-lactamase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LAY5_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERJ86624.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Zn-dependent hydrolase
L1_007_000M1_scaffold_1016_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10625..11986
DNA (1362bp) protein (454aa)
Putative multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K3E6_9FIRM
Putative multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase {ECO:0000313|EMBL:ERJ86625.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tRNA nucleotidyltransferase/poly(A) polymerase
L1_007_000M1_scaffold_1016_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11973..13007
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JK51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86626.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted nucleotidyltransferase
L1_007_000M1_scaffold_1016_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13252..13989
DNA (738bp) protein (246aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K302_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERJ86627.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14092..16398)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86628.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
CcoN; Cbb3-type cytochrome oxidase subunit 1
L1_007_000M1_scaffold_1016_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16652..18052
DNA (1401bp) protein (467aa)
DNA repair protein radA n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Y6_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA repair protein RadA
L1_007_000M1_scaffold_1016_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18054..19238
DNA (1185bp) protein (395aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LVV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93604.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
S-layer domain-containing protein
L1_007_000M1_scaffold_1016_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19353..20525
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86608.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fibronectin type III domain-containing protein
L1_007_000M1_scaffold_1016_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20612..21517)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JJZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86566.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21563..21889)
DNA (327bp) protein (109aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2V4_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ86567.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_20
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

Not on your lists

21897..23267
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Tupaia chinensis RepID=L9KK75_TUPCH
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000018116}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus.;" source="Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).;"
hypothetical protein
L1_007_000M1_scaffold_1016_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23179..24777)
DNA (1599bp) protein (533aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86568.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
metallophosphoesterase
L1_007_000M1_scaffold_1016_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25161..27362
DNA (2202bp) protein (734aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JJX5_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ86541.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27891..29063
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KP53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94032.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29060..29575
DNA (516bp) protein (172aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M402_9FIRM
CMP/dCMP deaminase zinc-binding protein
L1_007_000M1_scaffold_1016_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29725..32520)
DNA (2796bp) protein (932aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LX40_9FIRM
Glycosyl hydrolase family 3 protein {ECO:0000313|EMBL:ERJ94034.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32684..33223)
DNA (540bp) protein (180aa)
Putative stage V sporulation protein T n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3R0_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:ERJ96389.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
transcriptional regulator, AbrB family
L1_007_000M1_scaffold_1016_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33742..34140
DNA (399bp) protein (133aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCY1_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERJ96391.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GntR family transcriptional regulator
L1_007_000M1_scaffold_1016_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34137..35066
DNA (930bp) protein (310aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVR8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ96392.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
antibiotic transport system ATP-binding protein
L1_007_000M1_scaffold_1016_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35053..35208
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MAR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96393.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35205..37406
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96394.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative membrane protein
Displaying items 1-30 of 79 in total

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