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L1_007_000M1_scaffold_1016

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Displaying items 31-60 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1016_31
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37580..37795
DNA (216bp) protein (72aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96316.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_32
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38296..40116
DNA (1821bp) protein (607aa)
GTP-binding protein TypA n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW50_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:ERJ96315.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GTP-binding protein TypA/BipA
L1_007_000M1_scaffold_1016_33
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40249..40944
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96314.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Fibronectin type III domain.
L1_007_000M1_scaffold_1016_34
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41056..41736
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MAH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96313.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_35
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41978..43063
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVI9_9FIRM
L1_007_000M1_scaffold_1016_36
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43079..44242
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW45_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ERJ96310.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_37
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44523..45155
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96309.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_38
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45544..46002)
DNA (459bp) protein (153aa)
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M418_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERJ96494.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
acetyltransferase
L1_007_000M1_scaffold_1016_39
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45999..46928)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MB27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96493.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Beta-propeller domains of methanol dehydrogenase type
L1_007_000M1_scaffold_1016_40
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46925..48010)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96492.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_41
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48031..49329)
DNA (1299bp) protein (433aa)
Zn-finger in Ran binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD76_9FIRM
Zn-finger in Ran binding protein {ECO:0000313|EMBL:ERJ96491.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Putative virion core protein (lumpy skin disease virus)
L1_007_000M1_scaffold_1016_42
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49766..50041
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96490.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_43
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50207..50854)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96496.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_44
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50967..51686
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWN8_9FIRM
L1_007_000M1_scaffold_1016_45
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51927..52634)
DNA (708bp) protein (236aa)
Bacterial sugar transferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M427_9FIRM
Bacterial sugar transferase {ECO:0000313|EMBL:ERJ96504.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
capsular polysaccharide biosynthsis protein
L1_007_000M1_scaffold_1016_46
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53180..53425)
DNA (246bp) protein (82aa)
S4 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWP3_9FIRM
S4 domain protein {ECO:0000313|EMBL:ERJ96500.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_007_000M1_scaffold_1016_47
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53412..54236)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M423_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96499.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
mazG; MazG family protein
L1_007_000M1_scaffold_1016_48
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54258..54782)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MB32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96498.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1016_49
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55150..56448)
DNA (1299bp) protein (433aa)
Aminotransferase, class I/II n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M449_9FIRM
Aminotransferase, class I/II {ECO:0000313|EMBL:ERJ96524.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L1_007_000M1_scaffold_1016_50
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56675..58297
DNA (1623bp) protein (541aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW61_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERJ96522.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
spoVB; Stage V sporulation protein B
L1_007_000M1_scaffold_1016_51
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


58739..59161
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWR4_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SSU ribosomal protein S12P
L1_007_000M1_scaffold_1016_52
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


59390..59860
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M444_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SSU ribosomal protein S7P
L1_007_000M1_scaffold_1016_53
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59894..61969
DNA (2076bp) protein (692aa)
fusA2; translation elongation factor EF-G2 (EC:3.6.5.3)
Elongation factor G n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MB56_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_54
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62103..63302
DNA (1200bp) protein (400aa)
Elongation factor Tu n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW55_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
translation elongation factor Tu
L1_007_000M1_scaffold_1016_55
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63553..63981
DNA (429bp) protein (143aa)
Protein MraZ n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KDA5_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
mraZ protein
L1_007_000M1_scaffold_1016_56
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63991..64917
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWQ9_9FIRM
L1_007_000M1_scaffold_1016_57
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64921..65385
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M439_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96514.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ftsL; Putative cell division protein FtsL
L1_007_000M1_scaffold_1016_58
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65672..68023
DNA (2352bp) protein (784aa)
ftsI; Cell division protein FtsI/PbpB; Transpeptidase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MB50_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ERJ96513.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1016_59
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68072..69514
DNA (1443bp) protein (481aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW51_9FIRM
UDP-N-acetylmuramyl tripeptide synthetase
L1_007_000M1_scaffold_1016_60
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69533..70921
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD99_9FIRM
Displaying items 31-60 of 79 in total

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