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L1_007_000M1_scaffold_1027

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1027_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(168..1907)
DNA (1740bp) protein (580aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KF53_9FIRM
two component sensor kinase
L1_007_000M1_scaffold_1027_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1904..2578)
DNA (675bp) protein (225aa)
Putative response regulator ArlR n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JWS1_9FIRM
Putative response regulator ArlR {ECO:0000313|EMBL:ERJ90736.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
two component transcriptional regulator
L1_007_000M1_scaffold_1027_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2865..3443)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94897.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3671..4381)
DNA (711bp) protein (237aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5U4_9FIRM
L1_007_000M1_scaffold_1027_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4378..6261)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQZ5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glucose-inhibited division protein A
L1_007_000M1_scaffold_1027_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7005..8369)
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tRNA modification GTPase MnmE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K3G5_9FIRM
tRNA modification GTPase TrmE
L1_007_000M1_scaffold_1027_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9296..10339)
DNA (1044bp) protein (348aa)
R3H domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUU1_9FIRM
R3H domain protein {ECO:0000313|EMBL:ERJ96032.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted RNA-binding protein
L1_007_000M1_scaffold_1027_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10415..11569)
DNA (1155bp) protein (385aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC08_9FIRM
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:ERJ96031.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
YidC/Oxa1 family membrane protein insertase
L1_007_000M1_scaffold_1027_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11578..11853)
DNA (276bp) protein (92aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVF3_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1027_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11850..12218)
DNA (369bp) protein (123aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M2R5_9FIRM
L1_007_000M1_scaffold_1027_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12698..13234)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96027.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13237..14613
DNA (1377bp) protein (459aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBZ2_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
chromosomal replication initiator protein DnaA
L1_007_000M1_scaffold_1027_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14785..15324)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M2Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96024.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15351..16457
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00018259};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III, beta subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M9Q1_9FIRM
L1_007_000M1_scaffold_1027_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17295..17528
DNA (234bp) protein (78aa)
S4 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUF2_9FIRM
S4 domain protein {ECO:0000313|EMBL:ERJ95705.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1027_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17525..18676
DNA (1152bp) protein (384aa)
DNA replication and repair protein RecF n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB19_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
recF protein
L1_007_000M1_scaffold_1027_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18846..20792
DNA (1947bp) protein (649aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8R4_9FIRM
L1_007_000M1_scaffold_1027_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20805..21338
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M1T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95709.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1027_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21577..24243
DNA (2667bp) protein (889aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUF5_9FIRM
L1_007_000M1_scaffold_1027_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24401..25246
DNA (846bp) protein (282aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KTU4_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:ERJ95712.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted phosphohydrolases
L1_007_000M1_scaffold_1027_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25222..25671)
DNA (450bp) protein (150aa)
Putative stage V sporulation protein AC (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8R7_9FIRM
Putative stage V sporulation protein AC {ECO:0000313|EMBL:ERJ95713.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
stage V sporulation protein AC
L1_007_000M1_scaffold_1027_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26747..27781
DNA (1035bp) protein (345aa)
Stage V sporulation protein AD n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LB74_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:ERJ86734.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
stage V sporulation protein AD
L1_007_000M1_scaffold_1027_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27964..28323
DNA (360bp) protein (120aa)
Stage V sporulation protein AE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K389_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:ERJ86732.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
stage V sporulation protein AE
L1_007_000M1_scaffold_1027_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29362..30123)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MCE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96968.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30464..31174
DNA (711bp) protein (237aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KEL1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERJ96966.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31270..32484)
DNA (1215bp) protein (405aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Phosphofructokinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5F0_9FIRM
pfkA3; Putative 6-phosphofructokinase
L1_007_000M1_scaffold_1027_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33006..33638
DNA (633bp) protein (211aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87608.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1027_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33641..35137)
DNA (1497bp) protein (499aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96969.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L-fucose isomerase and related proteins
L1_007_000M1_scaffold_1027_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35421..35738)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXF7_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
thioredoxin
L1_007_000M1_scaffold_1027_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35806..36423)
DNA (618bp) protein (206aa)
Putative maltose O-acetyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KEL7_9FIRM
Putative maltose O-acetyltransferase {ECO:0000313|EMBL:ERJ96971.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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