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L1_007_000M1_scaffold_1104

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1104_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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215..1435
DNA (1221bp) protein (407aa)
Trigger factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ67_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
trigger factor
L1_007_000M1_scaffold_1104_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1490..2881
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIQ6_9FIRM
L1_007_000M1_scaffold_1104_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2945..3343
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77921.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_1104_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3706..5061
DNA (1356bp) protein (452aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI35_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CCZ77923.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
arylsulfatase regulator (Fe-S oxidoreductase)
L1_007_000M1_scaffold_1104_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5083..7386
DNA (2304bp) protein (768aa)
Protein translocase subunit secF/protein translocase subunit secD n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ73_9FIRM
Protein translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:CCZ77924.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
bifunctional preprotein translocase subunit SecD/SecF
L1_007_000M1_scaffold_1104_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7505..8752
DNA (1248bp) protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Serine hydroxymethyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIR3_9FIRM
glyA; serine hydroxymethyltransferase
L1_007_000M1_scaffold_1104_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8765..10057
DNA (1293bp) protein (431aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77926.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_1104_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10069..10251
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77927.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_1104_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10278..10523
DNA (246bp) protein (82aa)
PTS system lactose/cellobiose family IIC component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ78_9FIRM
PTS system lactose/cellobiose family IIC component {ECO:0000313|EMBL:CCZ77929.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sensory transduction protein
L1_007_000M1_scaffold_1104_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10598..11263
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77930.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11434..12237
DNA (804bp) protein (268aa)
3-hydroxybutyryl-coA dehydratase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3G1_9FIRM
3-hydroxybutyryl-coA dehydratase {ECO:0000313|EMBL:CCZ77931.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-hydroxybutyryl-coA dehydratase
L1_007_000M1_scaffold_1104_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12426..14708
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77932.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15030..16619
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77936.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_000M1_scaffold_1104_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16874..17569
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77937.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_1104_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17566..18501
DNA (936bp) protein (312aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH9_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_1104_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18601..19287
DNA (687bp) protein (229aa)
ABC transporter related protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBH4_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CCZ78057.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter-like protein
L1_007_000M1_scaffold_1104_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19284..21956
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78056.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22203..23120
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78055.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23197..23775
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78054.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_000M1_scaffold_1104_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23720..24400
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78053.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24433..24987
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78052.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_1104_22
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25369..26331
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S110_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68040.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L1_007_000M1_scaffold_1104_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26328..26639)
DNA (312bp) protein (104aa)
Transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWG9_ROSHA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEN96253.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_1104_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26770..27279
DNA (510bp) protein (170aa)
Nitroreductase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWH0_ROSHA
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEN96254.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_1104_25
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27950..28600)
DNA (651bp) protein (217aa)
Predicted membrane protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JJQ8_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY54550.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Predicted membrane protein
L1_007_000M1_scaffold_1104_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28789..29829
DNA (1041bp) protein (347aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3T1_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:CCZ78051.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_1104_27
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29870..30616
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E667_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX86754.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Tim44-like domain.
L1_007_000M1_scaffold_1104_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30808..31026
DNA (219bp) protein (73aa)
Sulfur carrier protein ThiS n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH2_9FIRM
Sulfur carrier protein ThiS {ECO:0000313|EMBL:CCZ78048.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sulfur carrier protein ThiS
L1_007_000M1_scaffold_1104_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31235..32005
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Thiazole synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBG9_9FIRM
thiazole-phosphate synthase
L1_007_000M1_scaffold_1104_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32017..33270
DNA (1254bp) protein (418aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3S7_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CCZ78046.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
thiH; thiamine biosynthesis protein ThiH
Displaying items 1-30 of 70 in total

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