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L1_007_000M1_scaffold_1120

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1120_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128..979)
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRL3_9FIRM
L1_007_000M1_scaffold_1120_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(967..2154)
DNA (1188bp) protein (396aa)
Putative aspartate transaminase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYZ9_9FIRM
Putative aspartate transaminase {ECO:0000313|EMBL:ERJ94719.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
class I/II aminotransferase
L1_007_000M1_scaffold_1120_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2185..2667)
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5V8_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ERJ94718.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Transcriptional regulators
L1_007_000M1_scaffold_1120_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2709..3554)
DNA (846bp) protein (282aa)
histidinol phosphate phosphatase (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR10_9FIRM
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:ERJ94717.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3875..4669)
DNA (795bp) protein (265aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K882_9FIRM
L1_007_000M1_scaffold_1120_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4662..5849)
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRK8_9FIRM
L1_007_000M1_scaffold_1120_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5851..6456)
DNA (606bp) protein (202aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYZ4_9FIRM
L1_007_000M1_scaffold_1120_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6453..7238)
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5V4_9FIRM
L1_007_000M1_scaffold_1120_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7248..8882)
DNA (1635bp) protein (545aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
trpGD; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate phosphoribosyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR05_9FIRM
L1_007_000M1_scaffold_1120_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8879..10345)
DNA (1467bp) protein (489aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K881_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:ERJ94711.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10867..11691
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94709.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
periplasmic copper-binding protein
L1_007_000M1_scaffold_1120_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11692..12708)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94708.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1120_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12724..14334)
DNA (1611bp) protein (537aa)
TrkA protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR00_9FIRM
TrkA protein {ECO:0000313|EMBL:ERJ94707.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
sodium/hydrogen exchanger
L1_007_000M1_scaffold_1120_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14375..15115)
DNA (741bp) protein (247aa)
ComF family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K877_9FIRM
ComF family protein {ECO:0000313|EMBL:ERJ94706.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted amidophosphoribosyltransferases
L1_007_000M1_scaffold_1120_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15474..15812)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR67_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ERJ94782.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
nifI3; nitrogen regulatory protein PII
L1_007_000M1_scaffold_1120_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15827..17059)
DNA (1233bp) protein (411aa)
Putative ammonia transporter n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8E4_9FIRM
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ammonium transporter
L1_007_000M1_scaffold_1120_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17167..18423)
DNA (1257bp) protein (419aa)
Glutamate dehydrogenase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRS0_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glutamate dehydrogenase/leucine dehydrogenase
L1_007_000M1_scaffold_1120_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18694..19833)
DNA (1140bp) protein (380aa)
ocd; ornithine cyclodeaminase Ocd (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR63_9FIRM
Ornithine cyclodeaminase {ECO:0000313|EMBL:ERJ94777.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20077..21288)
DNA (1212bp) protein (404aa)
NADPH-dependent butanol dehydrogenase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5W8_9FIRM
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:ERJ94728.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Alcohol dehydrogenase, class IV
L1_007_000M1_scaffold_1120_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21326..21850)
DNA (525bp) protein (175aa)
Nitroreductase family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KR98_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:ERJ94812.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
nitroreductase
L1_007_000M1_scaffold_1120_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21955..23088)
DNA (1134bp) protein (378aa)
soxB; sarcosine oxidase subunit beta (EC:1.5.3.1)
FAD dependent oxidoreductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8H2_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:ERJ94811.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23092..23415)
DNA (324bp) protein (108aa)
[2Fe-2S]-binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRU6_9FIRM
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:ERJ94810.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
NAD(P)H-nitrite reductase
L1_007_000M1_scaffold_1120_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23445..25031)
DNA (1587bp) protein (529aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZ87_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERJ94809.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ooxA1; opine oxidase subunit A
L1_007_000M1_scaffold_1120_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25036..25350)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M652_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94808.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
HcaD; NAD-dependent dehydrogenase
L1_007_000M1_scaffold_1120_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26006..26860
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8G6_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERJ94806.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
XylDLEGF operon transcriptional activator 1
L1_007_000M1_scaffold_1120_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26857..27321
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94805.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27388..27639)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94804.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1120_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27649..28575)
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M646_9FIRM
L1_007_000M1_scaffold_1120_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28776..29126)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94801.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1120_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29205..29645)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94800.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Displaying items 1-30 of 37 in total

View Taxonomy