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L1_007_000M1_scaffold_1189

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1189_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..204
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D4M9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69273.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_000M1_scaffold_1189_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(368..1438)
DNA (1071bp) protein (357aa)
Spermidine/putrescine-binding periplasmic protein PotD n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7J4_9FIRM
Spermidine/putrescine-binding periplasmic protein PotD {ECO:0000313|EMBL:CDB45310.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
potD; hypothetical protein
L1_007_000M1_scaffold_1189_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1501..2298)
DNA (798bp) protein (266aa)
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ00_9FIRM
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:CDB45311.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
binding-protein-dependent transport system inner membrane protein
L1_007_000M1_scaffold_1189_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2279..3139)
DNA (861bp) protein (287aa)
ABC spermidine/putrescine transporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4T2_9FIRM
ABC spermidine/putrescine transporter {ECO:0000313|EMBL:CDB45312.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
potB; spermidine/putrescine ABC transporter
L1_007_000M1_scaffold_1189_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3136..4164)
DNA (1029bp) protein (343aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
potA; spermidine/putrescine ABC transporter (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I535_9FIRM
L1_007_000M1_scaffold_1189_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4353..5585
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45314.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative conserved protein UCP016719
L1_007_000M1_scaffold_1189_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5604..6806
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45315.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hydrolase
L1_007_000M1_scaffold_1189_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7041..8276
DNA (1236bp) protein (412aa)
Glutamate dehydrogenase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ03_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Glu/Leu/Phe/Val dehydrogenase
L1_007_000M1_scaffold_1189_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8494..8745
DNA (252bp) protein (84aa)
Aminotransferase class I/II n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4T5_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDB45317.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
GntR family transcriptional regulator
L1_007_000M1_scaffold_1189_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8759..9658
DNA (900bp) protein (300aa)
Aminotransferase class I/II n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4T5_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDB45317.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
GntR family transcriptional regulator
L1_007_000M1_scaffold_1189_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9705..10502)
DNA (798bp) protein (266aa)
Putative aliphatic sulfonates transport permease protein SsuC n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I541_9FIRM
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:CDB45318.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
binding-protein-dependent transport systems inner membrane component
L1_007_000M1_scaffold_1189_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10495..11283)
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFG9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB45319.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ABC transporter-like protein
L1_007_000M1_scaffold_1189_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11346..12365)
DNA (1020bp) protein (340aa)
NMT1/THI5-like protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7K2_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CDB45320.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
NMT1/THI5 like domain protein
L1_007_000M1_scaffold_1189_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12601..13944
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45321.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_1189_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14148..15314
DNA (1167bp) protein (389aa)
Efflux transporter RND family MFP subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4U1_9FIRM
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDB45322.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RND family efflux transporter MFP subunit
L1_007_000M1_scaffold_1189_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15329..18439
DNA (3111bp) protein (1037aa)
Putative acriflavine resistance protein B n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I546_9FIRM
Putative acriflavine resistance protein B {ECO:0000313|EMBL:CDB45323.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
L1_007_000M1_scaffold_1189_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18580..20313
DNA (1734bp) protein (578aa)
ABC transporter ATP-binding protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFH5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB45324.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ABC transporter domain-containing protein
L1_007_000M1_scaffold_1189_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20441..21616
DNA (1176bp) protein (392aa)
Putative anaerobic nitric oxide reductase flavorubredoxin n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7K5_9FIRM
Putative anaerobic nitric oxide reductase flavorubredoxin {ECO:0000313|EMBL:CDB45325.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
flavodoxin/nitric oxide synthase
L1_007_000M1_scaffold_1189_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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21799..22212
DNA (414bp) protein (138aa)
Firmicute transcriptional repressor of class III stress n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ11_9FIRM
Firmicute transcriptional repressor of class III stress {ECO:0000313|EMBL:CDB45326.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transcriptional repressor CtsR
L1_007_000M1_scaffold_1189_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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22224..24899
DNA (2676bp) protein (892aa)
Negative regulator of genetic competence ClpC/MecB n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4U4_9FIRM
Negative regulator of genetic competence ClpC/MecB {ECO:0000313|EMBL:CDB45327.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ATPase AAA-2 domain protein
L1_007_000M1_scaffold_1189_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24899..26257
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I552_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA repair protein radA
L1_007_000M1_scaffold_1189_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26435..26914
DNA (480bp) protein (160aa)
Transcriptional regulator n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFI1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB45329.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
transcriptional regulator
L1_007_000M1_scaffold_1189_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27025..28149
DNA (1125bp) protein (375aa)
PIN domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7K9_9FIRM
PIN domain protein {ECO:0000313|EMBL:CDB45330.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_1189_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28161..28871
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ15_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_007_000M1_scaffold_1189_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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28868..29371
DNA (504bp) protein (168aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4U7_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L1_007_000M1_scaffold_1189_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29518..30990
DNA (1473bp) protein (491aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Glutamate--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I558_9FIRM
glutamyl-tRNA synthetase
L1_007_000M1_scaffold_1189_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31004..32446
DNA (1443bp) protein (481aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IFI7_9FIRM
L1_007_000M1_scaffold_1189_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32443..32904
DNA (462bp) protein (154aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Mini-ribonuclease 3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I7L4_9FIRM
ribonuclease III
L1_007_000M1_scaffold_1189_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32911..33495
DNA (585bp) protein (195aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJ19_9FIRM
L1_007_000M1_scaffold_1189_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33508..34254
DNA (747bp) protein (249aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J4V3_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDB45337.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
TrmH family RNA methyltransferase
Displaying items 1-30 of 36 in total

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