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L1_007_000M1_scaffold_1200

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1200_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..455
DNA (453bp) protein (151aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BZ09_9CLOT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDA69408.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_007_000M1_scaffold_1200_2
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

667..1200
DNA (534bp) protein (178aa)
Cupin domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJ03_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CCX75891.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_1200_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1264..2841
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Polyamine ABC transporter ATP-binding protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DGE5_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
L1_007_000M1_scaffold_1200_4
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2842..3678
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6R8_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCX75893.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ABC-type spermidine/putrescine transport system, permease component I
L1_007_000M1_scaffold_1200_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3718..5571
DNA (1854bp) protein (618aa)
ABC transporter permease protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAQ2_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCX75894.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ABC-type spermidine/putrescine transport system, permease component II
L1_007_000M1_scaffold_1200_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5866..7146)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75895.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
iron-only hydrogenase maturation protein HydF
L1_007_000M1_scaffold_1200_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7250..8644)
DNA (1395bp) protein (465aa)
Iron-only hydrogenase maturation rSAM protein HydG n=2 Tax=Clostridiales RepID=B0NFP6_CLOSV
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EDS06676.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
iron-only hydrogenase maturation protein HydG
L1_007_000M1_scaffold_1200_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8671..9705)
DNA (1035bp) protein (345aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Dorea sp. CAG:105 RepID=R5DJ09_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:CCX75896.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_1200_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9975..10832
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DGF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75897.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1200_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10844..11509
DNA (666bp) protein (222aa)
DnaJ domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6S1_9FIRM
DnaJ domain protein {ECO:0000313|EMBL:CCX75898.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_007_000M1_scaffold_1200_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11500..12027
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75899.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1200_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12093..12623
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75900.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
yjeF-like protein
L1_007_000M1_scaffold_1200_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12590..13327
DNA (738bp) protein (246aa)
Macro domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJ14_9FIRM
Macro domain protein {ECO:0000313|EMBL:CCX75901.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
macro domain protein
L1_007_000M1_scaffold_1200_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14068..15549
DNA (1482bp) protein (494aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Dorea sp. CAG:105 RepID=R5DGF6_9FIRM
L1_007_000M1_scaffold_1200_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15561..15728
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75903.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_1200_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15732..16979
DNA (1248bp) protein (416aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAR3_9FIRM
L1_007_000M1_scaffold_1200_17
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17362..18924
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75905.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1200_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18909..20759
DNA (1851bp) protein (617aa)
cell wall-associated serine proteinase (EC:3.4.21.96)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJ21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75906.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_1200_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20723..21820)
DNA (1098bp) protein (366aa)
Polysaccharide deacetylase n=1 Tax=Dorea sp. CAG:105 RepID=R5DGG1_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCX75907.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Polysaccharide deacetylase
L1_007_000M1_scaffold_1200_20
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21923..23302)
DNA (1380bp) protein (460aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Dorea sp. CAG:105 RepID=R5D6T1_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_1200_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23307..24515)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75909.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
alcohol dehydrogenase
L1_007_000M1_scaffold_1200_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24594..25046)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75910.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1200_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25243..27243)
DNA (2001bp) protein (667aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Ruminococcus lactaris RepID=B5CLA7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDY33977.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
NADH:flavin oxidoreductase
L1_007_000M1_scaffold_1200_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27474..28358
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CLA5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDY33975.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transcriptional regulator, LysR family
L1_007_000M1_scaffold_1200_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28492..29376)
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CLA4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDY33974.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
transcriptional regulator, LysR family
L1_007_000M1_scaffold_1200_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29604..30479
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Shikimate dehydrogenase n=2 Tax=Clostridium RepID=B6FJV0_9CLOT
hypothetical protein
L1_007_000M1_scaffold_1200_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30532..31713
DNA (1182bp) protein (394aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJU9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEA83643.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Major Facilitator Superfamily.
L1_007_000M1_scaffold_1200_28
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31774..32535
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Dorea sp. CAG:105 RepID=R5DGG5_9FIRM
L1_007_000M1_scaffold_1200_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32623..33129
DNA (507bp) protein (169aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Ruminococcus lactaris RepID=B5CL97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15758.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L1_007_000M1_scaffold_1200_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33117..34406
DNA (1290bp) protein (430aa)
TRAP transporter, DctM subunit n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL96_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDY33966.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
TRAP transporter, DctM subunit
Displaying items 1-30 of 34 in total

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