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L1_007_000M1_scaffold_1215

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1215_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..649)
DNA (648bp) protein (216aa)
ABC-type multidrug transport system, ATPase component n=4 Tax=Bacteroides vulgatus RepID=A6L7S0_BACV8
multidrug ABC transporter ATPase
Uncharacterized protein {ECO:0000313|EMBL:EOS04272.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(646..1575)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7R9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04271.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1652..2230)
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04270.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2243..2716)
DNA (474bp) protein (158aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=D4V4K6_BACVU
RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17746.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1215_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2868..3539)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04268.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4022..4648
DNA (627bp) protein (209aa)
Putative DNA-binding protein n=2 Tax=Bacteroides RepID=D4V4K8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04267.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000M1_scaffold_1215_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4657..6069)
DNA (1413bp) protein (471aa)
Outer membrane protein n=6 Tax=Bacteroides RepID=E5UWP7_9BACE
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04266.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6114..9239)
DNA (3126bp) protein (1042aa)
RND transporter, HAE1/HME family, permease protein n=2 Tax=Bacteroides RepID=C6Z141_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76884.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
AcrB/AcrD/AcrF family transporter
L1_007_000M1_scaffold_1215_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9239..10306)
DNA (1068bp) protein (356aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroides RepID=C6Z142_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS56353.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
lipoprotein
L1_007_000M1_scaffold_1215_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10483..11361
DNA (879bp) protein (293aa)
Transcriptional regulator n=4 Tax=Bacteroides RepID=A6L7R1_BACV8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EET14602.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_1215_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11427..12191
DNA (765bp) protein (255aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04262.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_1215_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12367..14355)
DNA (1989bp) protein (663aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase-like protein n=3 Tax=Bacteroides vulgatus RepID=D4V4L4_BACVU
L1_007_000M1_scaffold_1215_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14359..15150)
DNA (792bp) protein (264aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucosamine-6-phosphate deaminase n=7 Tax=Bacteroides RepID=NAGB_BACV8
L1_007_000M1_scaffold_1215_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15196..16431)
DNA (1236bp) protein (412aa)
Major facilitator family transporter n=7 Tax=Bacteroides RepID=A6L7Q7_BACV8
major facilitator family transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS56358.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_1215_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16450..17646)
DNA (1197bp) protein (399aa)
Renin-binding protein-related protein n=2 Tax=Bacteroides vulgatus RepID=A6L7Q6_BACV8
renin-binding protein-related protein
Renin-binding protein-related protein {ECO:0000313|EMBL:ABR41720.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1215_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17659..18573)
DNA (915bp) protein (305aa)
Dihydrodipicolinate synthetase family n=10 Tax=Bacteroides RepID=C3PVP0_9BACE
N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDS31643.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_1215_17
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18879..20084
DNA (1206bp) protein (402aa)
ROK family protein n=13 Tax=Bacteroides RepID=C3R7S4_9BACE
xylose repressor
ROK family protein {ECO:0000313|EMBL:EEO59388.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L1_007_000M1_scaffold_1215_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20199..20834
DNA (636bp) protein (212aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=A6L7Q3_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17732.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_1215_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21047..22129
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4V4M1_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR41716.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1215_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22277..26014
DNA (3738bp) protein (1246aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYH3_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS31647.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000M1_scaffold_1215_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26030..27619
DNA (1590bp) protein (530aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M3_BACVU
Putative outer membrane protein {ECO:0000313|EMBL:KDS31648.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000M1_scaffold_1215_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27632..28876
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7P9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41713.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_1215_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28989..29195)
DNA (207bp) protein (69aa)
HAD hydrolase, family IA n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9FY85_9BACE
beta-phosphoglucomutase
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY33875.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
Displaying 23 items

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