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L1_007_000M1_scaffold_1238

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1238_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..236
DNA (234bp) protein (78aa)
Transcriptional regulator, AraC family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6K1_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDR46762.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L1_007_000M1_scaffold_1238_2
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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629..1585
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G9B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20960.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L1_007_000M1_scaffold_1238_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1944..2849
DNA (906bp) protein (302aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
CRISPR-associated protein, Csn1 family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CL59_9FIRM
CRISPR-associated endonuclease, Csn1 family
L1_007_000M1_scaffold_1238_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2846..3718
DNA (873bp) protein (291aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJV3_9FIRM
CRISPR-associated protein, Cas1 family
L1_007_000M1_scaffold_1238_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3723..4028
DNA (306bp) protein (102aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Dorea sp. CAG:105 RepID=R5D6M4_9FIRM
CRISPR-associated Cas2
L1_007_000M1_scaffold_1238_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4025..4696
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D2J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74470.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
CRISPR-associated protein, Csn2 family
L1_007_000M1_scaffold_1238_7
unknown

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comp(5452..5709)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_007_000M1_scaffold_1238_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6095..7495
DNA (1401bp) protein (467aa)
hydroxypyruvate reductase (EC:1.1.1.81)
MOFRL family protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDQ9_9FIRM
MOFRL family protein {ECO:0000313|EMBL:CCX74006.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_1238_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7543..8064
DNA (522bp) protein (174aa)
Acetyltransferase (GNAT) family n=1 Tax=Dorea sp. CAG:105 RepID=R5D1H5_9FIRM
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CCX74003.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Acetyltransferase (GNAT) family.
L1_007_000M1_scaffold_1238_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8235..8567
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74001.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8790..9071
DNA (282bp) protein (94aa)
Peptide deformylase n=1 Tax=Dorea sp. CAG:105 RepID=R5D5D7_9FIRM
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
N-formylmethionyl-tRNA deformylase
L1_007_000M1_scaffold_1238_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9245..10600)
DNA (1356bp) protein (452aa)
Dihydropteroate synthase n=1 Tax=Dorea sp. CAG:105 RepID=R5DB18_9FIRM
Dihydropteroate synthase {ECO:0000313|EMBL:CCX73997.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
FolP; dihydropteroate synthase
L1_007_000M1_scaffold_1238_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10694..13939)
DNA (3246bp) protein (1082aa)
Bacterial group 2 Ig-like protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D1B7_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCX73995.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Bacterial Ig-like domain (group 2).
L1_007_000M1_scaffold_1238_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14169..14630)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D1D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73993.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14728..15153)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73992.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
heat shock protein Hsp20
L1_007_000M1_scaffold_1238_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15538..16212
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73991.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Uncharacterised protein family (UPF0153).
L1_007_000M1_scaffold_1238_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16244..19018
DNA (2775bp) protein (925aa)
Small GTP-binding protein domain protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MTW6_9FIRM
Small GTP-binding protein domain protein {ECO:0000313|EMBL:EOS71217.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
small GTP-binding protein domain
L1_007_000M1_scaffold_1238_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19211..20122)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D5A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73989.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20187..23414)
DNA (3228bp) protein (1076aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Dorea sp. CAG:105 RepID=R5D1D2_9FIRM
L1_007_000M1_scaffold_1238_20
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23590..24459)
DNA (870bp) protein (290aa)
Uncharacterized conserved protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAZ2_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX73987.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25006..25938
DNA (933bp) protein (311aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDL7_9FIRM
Transporter auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:CCX73986.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted permeases
L1_007_000M1_scaffold_1238_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26147..27127
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D5A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73984.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
iron-sulfur binding reductase
L1_007_000M1_scaffold_1238_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27174..27881
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D1C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73983.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_24
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28049..28495
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73982.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_25
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28509..29447
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73981.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
thiosulfate sulfurtransferase
L1_007_000M1_scaffold_1238_26
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29704..30423)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D1A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73980.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_27
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30746..31345
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D594_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73979.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_28
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31419..32108
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D1C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73978.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32148..33251
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73977.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_1238_30
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33444..34352
DNA (909bp) protein (303aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Dorea sp. CAG:105 RepID=R5DDK7_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:CCX73976.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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