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L1_007_000M1_scaffold_1239

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1239_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..559
-----------------
DNA (558bp)
protein (186aa)
Transporter SSS family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGC2_9FIRM
Transporter SSS family {ECO:0000313|EMBL:CDB45594.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Na+/solute symporter
L1_007_000M1_scaffold_1239_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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716..4120
-----------------
DNA (3405bp)
protein (1135aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA polymerase III alpha subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8G6_9FIRM
DNA polymerase III subunit alpha
L1_007_000M1_scaffold_1239_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4226..5023
-----------------
DNA (798bp)
protein (266aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJR9_9FIRM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:CDB45596.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Electron transfer flavoprotein alpha/beta-subunit
L1_007_000M1_scaffold_1239_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5035..6144
-----------------
DNA (1110bp)
protein (370aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5J7_9FIRM
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CDB45597.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Electron transfer flavoprotein alpha/beta-subunit
L1_007_000M1_scaffold_1239_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6231..6425
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I605_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45598.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6444..8192
-----------------
DNA (1749bp)
protein (583aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Pyruvate kinase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WLM4_9FIRM
pyruvate kinase
L1_007_000M1_scaffold_1239_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8211..9575
-----------------
DNA (1365bp)
protein (455aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45600.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9742..10944
-----------------
DNA (1203bp)
protein (401aa)
Type II secretion system F domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS2_9FIRM
Type II secretion system F domain protein {ECO:0000313|EMBL:CDB45601.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
type II secretion system F domain-containing protein
L1_007_000M1_scaffold_1239_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10955..11338
-----------------
DNA (384bp)
protein (128aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K1_9FIRM
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:CDB45602.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_1239_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11292..11795
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I609_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45603.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11806..12105
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45604.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12131..12592
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45605.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12589..13509
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45606.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13566..14231)
-----------------
DNA (666bp)
protein (222aa)
UPF0173 metal-dependent hydrolase BN533_00733 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K5_9FIRM
UPF0173 metal-dependent hydrolase BN533_00733 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
beta-lactamase
L1_007_000M1_scaffold_1239_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14379..15473
-----------------
DNA (1095bp)
protein (365aa)
Tapetum specific protein TAP35/TAP44 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I614_9FIRM
Tapetum specific protein TAP35/TAP44 {ECO:0000313|EMBL:CDB45608.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_1239_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15538..16002
-----------------
DNA (465bp)
protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGD4_9FIRM
RNA methyltransferase
L1_007_000M1_scaffold_1239_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16021..16380
-----------------
DNA (360bp)
protein (120aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ptpS; queuosine biosynthesis protein queD (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8H8_9FIRM
L1_007_000M1_scaffold_1239_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16380..17159
-----------------
DNA (780bp)
protein (260aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
GTP cyclohydrolase FolE2 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS9_9FIRM
hypothetical protein
L1_007_000M1_scaffold_1239_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17156..18349
-----------------
DNA (1194bp)
protein (398aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K8_9FIRM
Dihydropteroate synthase {ECO:0000313|EMBL:CDB45612.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_1239_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18331..18798
-----------------
DNA (468bp)
protein (156aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I616_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CDB45613.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
L1_007_000M1_scaffold_1239_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18800..20023
-----------------
DNA (1224bp)
protein (408aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45614.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
protein of unknown function DUF815
L1_007_000M1_scaffold_1239_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20036..21259
-----------------
DNA (1224bp)
protein (408aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8I2_9FIRM
L1_007_000M1_scaffold_1239_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21605..22297)
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45616.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative DNA alkylation repair enzyme
L1_007_000M1_scaffold_1239_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22379..23212
-----------------
DNA (834bp)
protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5L2_9FIRM
L1_007_000M1_scaffold_1239_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23262..23468)
-----------------
DNA (207bp)
protein (69aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I620_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:CDB45618.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_1239_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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23638..24129
-----------------
DNA (492bp)
protein (164aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGE4_9FIRM
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:CDB45619.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
YbaK/prolyl-tRNA synthetase associated region
L1_007_000M1_scaffold_1239_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24258..25904
-----------------
DNA (1647bp)
protein (549aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8I5_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDB45620.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L1_007_000M1_scaffold_1239_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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25933..26307
-----------------
DNA (375bp)
protein (125aa)
Glutathione synthase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AE19_9FIRM
Glutathione synthase {ECO:0000313|EMBL:CCX40963.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
glutathione synthase
L1_007_000M1_scaffold_1239_29
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26362..26595)
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=2 Tax=Blautia RepID=A7B0U6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EEX21503.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L1_007_000M1_scaffold_1239_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26719..27432
-----------------
DNA (714bp)
protein (238aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AN81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90009.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Displaying items 1-30 of 50 in total

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