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L1_007_000M1_scaffold_1257

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1257_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

L1_007_000M1_scaffold_1257_2
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

152..754
DNA (603bp) protein (201aa)
Resolvase protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PKE6_9BACE
Resolvase protein {ECO:0000313|EMBL:EGF50427.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
invertase
L1_007_000M1_scaffold_1257_3
unknown

Not on your lists

881..982
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_000M1_scaffold_1257_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1242..2366)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCJ1_BACSE
Sodium pump decarboxylase, gamma subunit {ECO:0000313|EMBL:EDS16642.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L1_007_000M1_scaffold_1257_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2387..2992)
DNA (606bp) protein (202aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=3 Tax=Bacteroides RepID=B0NLW8_BACSE
L1_007_000M1_scaffold_1257_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3102..3650
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B8P6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49702.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L1_007_000M1_scaffold_1257_7
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3664..4338
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Bacteroides RepID=F3PLT3_9BACE
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L1_007_000M1_scaffold_1257_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4373..5251
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AFB4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49705.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L1_007_000M1_scaffold_1257_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5341..6033
DNA (693bp) protein (231aa)
HAD hydrolase, TIGR02254 family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLX2_BACSE
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EDS16647.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
HAD superfamily (subfamily IA) hydrolase, TIGR02254
L1_007_000M1_scaffold_1257_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6090..6737
DNA (648bp) protein (216aa)
Membrane protein, MarC family n=3 Tax=Bacteroides RepID=B0NLX3_BACSE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
conserved hypothetical protein TIGR00427
L1_007_000M1_scaffold_1257_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6928..8454)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=S3YAQ7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20014.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
membrane protein
L1_007_000M1_scaffold_1257_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8482..11280)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YQR0_BACSE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS16651.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
membrane protein
L1_007_000M1_scaffold_1257_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11722..12849
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ART9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA49266.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
ATPase
L1_007_000M1_scaffold_1257_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12959..14569)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NLT3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20324.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
SusD family.
L1_007_000M1_scaffold_1257_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14587..17508)
DNA (2922bp) protein (974aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ABG0_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA49268.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
TonB-dependent receptor
L1_007_000M1_scaffold_1257_16
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17453..17638)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bacteroides eggerthii CAG:109 RepID=R5JV19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY56509.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
L1_007_000M1_scaffold_1257_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18102..19307)
DNA (1206bp) protein (402aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroides RepID=B0NLT1_BACSE
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDA49270.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
integrase
L1_007_000M1_scaffold_1257_18
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19759..22812
DNA (3054bp) protein (1018aa)
TonB-dependent Receptor Plug domain-containing protein n=1 Tax=Bacteroides eggerthii CAG:109 RepID=R5K3I7_9BACE
TonB-dependent Receptor Plug domain-containing protein {ECO:0000313|EMBL:CCY55527.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
TonB-linked outer membrane protein
L1_007_000M1_scaffold_1257_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22837..24315
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEF7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20012.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L1_007_000M1_scaffold_1257_20
unknown

Not on your lists

comp(24389..24490)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_000M1_scaffold_1257_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24784..27774
DNA (2991bp) protein (997aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YRN2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20318.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
TonB-dependent receptor plug
L1_007_000M1_scaffold_1257_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27788..29455
DNA (1668bp) protein (556aa)
SusD family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NV97_BACSE
SusD family protein {ECO:0000313|EMBL:EDS14290.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
RagB/SusD domain protein
L1_007_000M1_scaffold_1257_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29689..30948
DNA (1260bp) protein (420aa)
GTPase HflX n=2 Tax=Bacteroides stercoris RepID=B0NV96_BACSE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
GTP-binding protein HflX
L1_007_000M1_scaffold_1257_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30989..32974
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZHV8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20315.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L1_007_000M1_scaffold_1257_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33149..34789
DNA (1641bp) protein (547aa)
fumarase (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=2 Tax=Bacteroides stercoris RepID=B0NV93_BACSE
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDS14286.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_007_000M1_scaffold_1257_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34907..36013)
DNA (1107bp) protein (369aa)
Pectate lyase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YRM7_BACSE
Pectate lyase {ECO:0000313|EMBL:EPH20313.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
pectate lyase, PelA/Pel-15E family
L1_007_000M1_scaffold_1257_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36124..37449)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YF92_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20312.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
tolC; putative outer membrane protein
L1_007_000M1_scaffold_1257_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37446..40478)
DNA (3033bp) protein (1011aa)
RND transporter HAE1 family n=2 Tax=Bacteroides RepID=R6AKL0_9BACE
HAE1 family hydrophobic/amphiphilic exporter-1 (Mainly G-bacteria) {ECO:0000313|EMBL:EPH20311.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
putative AcrB/AcrD/AcrF family efflux transporter
L1_007_000M1_scaffold_1257_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40625..41707)
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=B0NV88_BACSE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDS14281.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative membrane fusion protein precursor
L1_007_000M1_scaffold_1257_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41839..42870)
DNA (1032bp) protein (344aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Bacteroides stercoris CC31F RepID=S3YBF9_BACSE
ribosome small subunit-dependent GTPase A
Displaying items 1-30 of 48 in total

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