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L1_007_000M1_scaffold_1350

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1350_1
unknown

Not on your lists

3..158
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_000M1_scaffold_1350_2
unknown

Not on your lists

161..484
DNA (324bp) protein (108aa)

This feature has no annotations

L1_007_000M1_scaffold_1350_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

489..818
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036B854B
Uncharacterized protein {ECO:0000313|EMBL:CDD26020.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_000M1_scaffold_1350_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

845..2293
DNA (1449bp) protein (483aa)
Polysaccharide biosynthesis protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLT6_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFV16175.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_007_000M1_scaffold_1350_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2309..3823
DNA (1515bp) protein (505aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MK82_9CLOT
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits {ECO:0000313|EMBL:AGF58319.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_000M1_scaffold_1350_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3839..4429
DNA (591bp) protein (197aa)
putative sugar phosphate isomerase involved in capsule formation (EC:5.3.1.13)
Putative sugar phosphate isomerase involved in capsule formation {ECO:0000313|EMBL:AGF58316.1}; EC=5.3.1.13 {ECO:0000313|EMBL:AGF58316.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Putative sugar phosphate isomerase involved in capsule formation n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUG6_9CLOT
L1_007_000M1_scaffold_1350_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4422..4796
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037AC172
Uncharacterized protein {ECO:0000313|EMBL:EHO35291.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1350_8
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4848..6113
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000372FC44
Uncharacterized protein {ECO:0000313|EMBL:EDM23175.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
L1_007_000M1_scaffold_1350_9
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6133..7266
DNA (1134bp) protein (378aa)
Glycosyltransferase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQU2_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:CDF57721.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Glycosyltransferase
L1_007_000M1_scaffold_1350_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7652..8008)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36948.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_1350_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8126..8509)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36948.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L1_007_000M1_scaffold_1350_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8460..8795)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22944.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Transposase helper protein
L1_007_000M1_scaffold_1350_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8800..9627
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36145.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L1_007_000M1_scaffold_1350_14
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9670..10242
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K9S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40197.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_007_000M1_scaffold_1350_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10399..11109)
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB25_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE36148.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_1350_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11310..12521
DNA (1212bp) protein (404aa)
glucosyltransferase-S (EC:3.2.1.96)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36149.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_007_000M1_scaffold_1350_17
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12612..13838
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32989.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_007_000M1_scaffold_1350_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13851..14273
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32988.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_007_000M1_scaffold_1350_19
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14286..14525
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32988.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_007_000M1_scaffold_1350_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14672..15121
DNA (450bp) protein (150aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9V3_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CDE36150.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional regulator, BadM/Rrf2 family
L1_007_000M1_scaffold_1350_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15227..15985
DNA (759bp) protein (253aa)
Iron-regulated ABC transporter ATPase subunit SufC n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA07_9FIRM
Iron-regulated ABC transporter ATPase subunit SufC {ECO:0000313|EMBL:CDE36151.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Iron-regulated ABC transporter ATPase subunit SufC
L1_007_000M1_scaffold_1350_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16037..17443
DNA (1407bp) protein (469aa)
FeS assembly protein SufB n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HD69_9FIRM
FeS assembly protein SufB {ECO:0000313|EMBL:CDE36152.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Iron-regulated ABC transporter membrane component SufB
L1_007_000M1_scaffold_1350_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17465..18562
DNA (1098bp) protein (366aa)
SufB/sufD domain protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB31_9FIRM
SufB/sufD domain protein {ECO:0000313|EMBL:CDE36153.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L1_007_000M1_scaffold_1350_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18549..19766
DNA (1218bp) protein (406aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H901_9FIRM
L1_007_000M1_scaffold_1350_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19756..20181
DNA (426bp) protein (142aa)
SUF system FeS assembly protein NifU family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9V8_9FIRM
SUF system FeS assembly protein NifU family {ECO:0000313|EMBL:CDE36155.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
SUF system FeS assembly protein, NifU family
L1_007_000M1_scaffold_1350_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20251..21759
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36156.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
polysaccharide lyase family 1-like pectate lyase
L1_007_000M1_scaffold_1350_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21781..21978
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HD76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36157.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_007_000M1_scaffold_1350_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21995..22891
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36158.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L1_007_000M1_scaffold_1350_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22898..23224
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H906_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36159.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_007_000M1_scaffold_1350_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23221..23691
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H906_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36159.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Displaying items 1-30 of 42 in total

View Taxonomy