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L1_007_000M1_scaffold_1358

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1358_1
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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157..267
DNA (111bp) protein (37aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SMH9_CLOSY
Transposase Mutator family {ECO:0000313|EMBL:CDD88027.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_1358_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

287..463
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BJA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72310.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_007_000M1_scaffold_1358_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(460..660)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05239.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_1358_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(700..1524)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47189.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative prophage repressor
L1_007_000M1_scaffold_1358_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1708..2430
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47190.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L1_007_000M1_scaffold_1358_6
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2446..2679
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LUY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62624.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L1_007_000M1_scaffold_1358_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2998..3444
DNA (447bp) protein (149aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B913_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERI68308.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000M1_scaffold_1358_8
unknown

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3564..3944
DNA (381bp) protein (127aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_9
unknown

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comp(3935..4195)
DNA (261bp) protein (87aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4419..4562
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26214.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_000M1_scaffold_1358_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4638..6230
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO24934.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
resolvase, n-terminal:recombinase
L1_007_000M1_scaffold_1358_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6230..6979
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26216.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recombinase
L1_007_000M1_scaffold_1358_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6976..8628
DNA (1653bp) protein (551aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21805.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
resolvase
L1_007_000M1_scaffold_1358_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8625..9371
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25573.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_007_000M1_scaffold_1358_15
unknown

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9547..9816
DNA (270bp) protein (90aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_16
unknown

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9831..10025
DNA (195bp) protein (65aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10038..10319
DNA (282bp) protein (94aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YC66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63133.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transcriptional regulator
L1_007_000M1_scaffold_1358_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10316..10807
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF52302.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_000M1_scaffold_1358_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11234..11695
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DAE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76511.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_000M1_scaffold_1358_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11714..12184
DNA (471bp) protein (157aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHX0_9FIRM
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDB25572.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_007_000M1_scaffold_1358_21
unknown

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12948..13094
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13125..14246
DNA (1122bp) protein (374aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Oscillibacter RepID=U2PT52_9FIRM
Putative serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERK61158.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_007_000M1_scaffold_1358_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14374..15711
DNA (1338bp) protein (446aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QBA6_9FIRM
L1_007_000M1_scaffold_1358_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15872..16282
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RSP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61123.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_007_000M1_scaffold_1358_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16352..17905)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QY51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61124.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative surface layer protein
L1_007_000M1_scaffold_1358_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18124..20223
DNA (2100bp) protein (700aa)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Oscillibacter RepID=U2PT57_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ERK61126.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
recJ; single-stranded-DNA-specific exonuclease RecJ
L1_007_000M1_scaffold_1358_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20220..22433
DNA (2214bp) protein (738aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
Putative GTP diphosphokinase n=2 Tax=Oscillibacter RepID=U2QBB1_9FIRM
Putative GTP diphosphokinase {ECO:0000313|EMBL:ERK61127.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L1_007_000M1_scaffold_1358_28
unknown

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23239..23502
DNA (264bp) protein (88aa)

This feature has no annotations

L1_007_000M1_scaffold_1358_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23563..24009
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Oscillibacter RepID=U2QA89_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L1_007_000M1_scaffold_1358_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24006..24449
DNA (444bp) protein (148aa)
SnoaL-like polyketide cyclase n=2 Tax=Oscillibacter RepID=U2QT92_9FIRM
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:ERK59756.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 49 in total

View Taxonomy