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L1_007_000M1_scaffold_1367

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1367_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(211..840)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LLD7_9FIRM
L1_007_000M1_scaffold_1367_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(858..1298)
DNA (441bp) protein (147aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LEP2_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:ERJ87934.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1367_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1411..2094)
DNA (684bp) protein (228aa)
Universal bacterial protein YeaZ n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5E0_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:ERJ96954.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved hypothetical protein
L1_007_000M1_scaffold_1367_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2075..2524)
DNA (450bp) protein (150aa)
Hydrolase, P-loop family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MCC9_9FIRM
Hydrolase, P-loop family {ECO:0000313|EMBL:ERJ96953.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved hypothetical nucleotide-binding protein
L1_007_000M1_scaffold_1367_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2544..4214)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
fhs; Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXD4_9FIRM
L1_007_000M1_scaffold_1367_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4399..5703
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KXW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96950.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5999..7180)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M5T6_9FIRM
L1_007_000M1_scaffold_1367_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7728..10907)
DNA (3180bp) protein (1060aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Carbohydrate binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB87_9FIRM
Glycosyl hydrolase family 9./Carbohydrate binding domain./N-terminal ig-like domain of cellulase.
L1_007_000M1_scaffold_1367_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11265..14717)
DNA (3453bp) protein (1151aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Endoglucanase 1 domain protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JTK6_9FIRM
Glycosyl hydrolase family 9.
L1_007_000M1_scaffold_1367_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14974..15699)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89579.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted metal-dependent hydrolase
L1_007_000M1_scaffold_1367_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16081..17313
DNA (1233bp) protein (411aa)
Chloride transporter, ClC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBI4_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:ERJ89602.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Chloride channel protein EriC
L1_007_000M1_scaffold_1367_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17375..18058)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JTM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89601.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18103..18411)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89600.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1367_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18767..19111)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LPG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91384.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_15
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19276..20706)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FHB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE13087.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L1_007_000M1_scaffold_1367_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20995..21696)
DNA (702bp) protein (234aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KT09_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ95215.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21857..22345
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K381_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86550.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_1367_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22213..22503)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JYR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91436.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22544..24037)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KH56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91435.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24050..25762)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LPL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91434.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type uncharacterized transport system.
L1_007_000M1_scaffold_1367_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25779..26486)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91433.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_1367_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26486..27586)
DNA (1101bp) protein (367aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KGQ1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ91432.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type multidrug transport system, ATPase component
L1_007_000M1_scaffold_1367_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27726..29189)
DNA (1464bp) protein (488aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
gltX; Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JYR0_9FIRM
L1_007_000M1_scaffold_1367_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29227..30153)
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KH50_9FIRM
riboflavin biosynthesis protein RibF
L1_007_000M1_scaffold_1367_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30170..31081)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tRNA pseudouridine 55 synthase (EC:5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LPL4_9FIRM
L1_007_000M1_scaffold_1367_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31078..32031)
DNA (954bp) protein (318aa)
DHHA1 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWE8_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:ERJ91428.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Exopolyphosphatase-related proteins
L1_007_000M1_scaffold_1367_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32052..32432)
DNA (381bp) protein (127aa)
Ribosome-binding factor A n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KGP6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ribosome-binding factor A
L1_007_000M1_scaffold_1367_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32524..34995)
DNA (2472bp) protein (824aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JYQ5_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
infB; Translation initiation factor IF-2
L1_007_000M1_scaffold_1367_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35136..35471)
DNA (336bp) protein (112aa)
Ribosomal protein L7Ae n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KH45_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:ERJ91425.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved hypothetical protein
L1_007_000M1_scaffold_1367_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35425..35718)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LPK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91424.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved hypothetical protein
Displaying items 1-30 of 113 in total

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