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L1_007_000M1_scaffold_1409

Search features with annotation key words

Displaying items 31-42 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1409_31
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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35654..36571
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JUW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35027.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Predicted RNA-binding protein
L1_007_000M1_scaffold_1409_32
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36574..38013
DNA (1440bp) protein (480aa)
acetylornithine aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Acetylornithine aminotransferase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMG8_CLOSH
L1_007_000M1_scaffold_1409_33
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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38016..38945
DNA (930bp) protein (310aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N009_9FIRM
L1_007_000M1_scaffold_1409_34
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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38945..39454
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJ56_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDB99673.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
putative acetyltransferase
L1_007_000M1_scaffold_1409_35
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39471..40820
DNA (1350bp) protein (450aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8A8_9CLOT
L1_007_000M1_scaffold_1409_36
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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40832..41587
DNA (756bp) protein (252aa)
Tetratricopeptide TPR_1 repeat-containing protein n=7 Tax=Clostridium thermocellum RepID=A3DE83_CLOTH
Uncharacterized protein {ECO:0000313|EMBL:GAE87457.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
hypothetical protein
L1_007_000M1_scaffold_1409_37
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42196..43440)
DNA (1245bp) protein (415aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FR41_9CLOT
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EMS72826.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L1_007_000M1_scaffold_1409_38
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(43673..45934)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKB8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY76886.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
L1_007_000M1_scaffold_1409_39
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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46035..46676
DNA (642bp) protein (214aa)
Ribose/galactose isomerase n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TML7_9FIRM
Ribose/galactose isomerase
Ribose/galactose isomerase {ECO:0000313|EMBL:AIF54192.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L1_007_000M1_scaffold_1409_40
unknown

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comp(47197..47331)
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_000M1_scaffold_1409_41
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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47526..47756
DNA (231bp) protein (77aa)
Helix-turn-helix domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3S8_ETHHY
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADU26495.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_007_000M1_scaffold_1409_42
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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47854..48072
DNA (219bp) protein (73aa)
Helix-turn-helix n=1 Tax=Clostridium sp. CAG:575 RepID=R6I1H4_9CLOT
Helix-turn-helix {ECO:0000313|EMBL:CDB31937.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
helix-turn-helix domain-containing protein
Displaying items 31-42 of 42 in total

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